Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I01
         (641 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g03370.1 68418.m00290 acylphosphatase family contains Pfam PF...    43   2e-04
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam...    30   1.1  
At1g64960.1 68414.m07363 expressed protein                             30   1.5  
At2g22870.1 68415.m02715 expressed protein                             27   8.0  

>At5g03370.1 68418.m00290 acylphosphatase family contains Pfam
           PF00708: Acylphosphatase
          Length = 171

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 37/65 (56%)
 Frame = +2

Query: 287 GRVQGVFFRKYTKEQADKLGLRGXCKNRGHRTVLGHMQGTLDKIEVMMHWLKTTGSPSSK 466
           GRVQGV +R +T E A++LG++G  +NR   +V     G  + ++  MH     G P++ 
Sbjct: 90  GRVQGVCYRNWTVENAEQLGIKGWVRNRRDGSVEALFSGPPEAVD-EMHQRCRRGPPAAM 148

Query: 467 IDKVE 481
           +  +E
Sbjct: 149 VTGLE 153


>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
           protein 
          Length = 454

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 267 LWILKCLAGFKEFSSENIPKSKPINWDFEAXAKTEVIELSWD 392
           LW LK     +E+S  +   S  I++DF+   K EV+ L+W+
Sbjct: 142 LWSLKSYKCMEEYSLPDA--SSLIDFDFDESKKLEVVSLAWE 181


>At1g64960.1 68414.m07363 expressed protein
          Length = 1168

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 192  PHFINTGSDESAALIAVLS*RLCFGLWILKC 284
            P FIN  S+ES+   +    +LCF  W+L C
Sbjct: 1029 PCFINNDSEESSYTSSFNHIKLCFPSWLLTC 1059


>At2g22870.1 68415.m02715 expressed protein
          Length = 300

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 544 MVFSNTEIIIGQFRDLLHVSELDFVDFTARTSCCFK 437
           MV   + I+IG F     + E++FV  +AR   C K
Sbjct: 82  MVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPK 117


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,660,767
Number of Sequences: 28952
Number of extensions: 205513
Number of successful extensions: 437
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)