Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_H22
         (593 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27569| Best HMM Match : UPF0131 (HMM E-Value=0.0061)                37   0.014
SB_32590| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.93 
SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.2  
SB_19520| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.2  
SB_56633| Best HMM Match : CbiX (HMM E-Value=4.6)                      30   1.6  
SB_20065| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_9399| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.6  
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_15291| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_10829| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_37336| Best HMM Match : Peptidase_S7 (HMM E-Value=2.7)              28   4.9  
SB_13192| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  

>SB_27569| Best HMM Match : UPF0131 (HMM E-Value=0.0061)
          Length = 140

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +1

Query: 271 RLDNHQLDFIKYSEHWRG-ASATIIPTEHAHVWGAIWXLHDQDLPSLXRQEXVDTNWYFA 447
           +LD ++L F  Y  +  G  SA+I+    + V GA++ L    L  L + E VD   Y  
Sbjct: 20  KLDGYKLGF--YFNNGTGFGSASIVREPKSVVHGALYTLEKGGLEKLDKFEWVDREGYRR 77

Query: 448 KSVNVMTSDGVSVQCRTYQQT 510
             V V    G  V+C  Y  T
Sbjct: 78  VQVTVELDSGEKVECTAYIAT 98


>SB_32590| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 315

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +1

Query: 430 TNWYFAKSVNVMTSDGVSVQCRTYQQTINPPLRKNGEELPLERRPCI 570
           ++W F      + S+ V+ +C+  +QT+    + NG+ LP +  P I
Sbjct: 139 SDWEFTSGFTSIVSELVNNRCKEARQTLEHIAKLNGKNLPSDVMPAI 185


>SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 983

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 167 WIRSKIPFCILRMGVICLK 223
           WIRSK+ F +LR  ++CL+
Sbjct: 938 WIRSKVSFALLRAALLCLR 956


>SB_19520| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 503

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 167 WIRSKIPFCILRMGVICLK 223
           WIRSK+ F +LR  ++CL+
Sbjct: 458 WIRSKVSFALLRAALLCLR 476


>SB_56633| Best HMM Match : CbiX (HMM E-Value=4.6)
          Length = 344

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 167 WIRSKIPFCILRMGVICLK 223
           WIR+K+ F ILR  ++CL+
Sbjct: 300 WIRAKVSFAILRSALLCLR 318


>SB_20065| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 163

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 167 WIRSKIPFCILRMGVICLK 223
           WIR+K+ F ILR  ++CL+
Sbjct: 118 WIRAKVSFAILRSALLCLR 136


>SB_9399| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 651

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 167 WIRSKIPFCILRMGVICLK 223
           WIR+K+ F ILR  ++CL+
Sbjct: 606 WIRAKVSFAILRSALLCLR 624


>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 255

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 237 DTDTFFKQITPIRKIQKGIFDRIHHLT 157
           D D  ++ +   RK++KGIF R+H  T
Sbjct: 172 DEDHIYETVDKPRKVKKGIFRRVHKKT 198


>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1555

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 167  WIRSKIPFCILRMGVICLK 223
            WIR+++ F +LR  +ICL+
Sbjct: 1510 WIRARVSFALLRSALICLR 1528


>SB_15291| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 747

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 167 WIRSKIPFCILRMGVICLK 223
           WIR+++ F +LR  ++CL+
Sbjct: 704 WIRARVSFALLRSALVCLR 722


>SB_10829| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 417

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 167 WIRSKIPFCILRMGVICLK 223
           WIR+K+ F  LR  ++CL+
Sbjct: 372 WIRAKVSFAFLRSALLCLR 390


>SB_37336| Best HMM Match : Peptidase_S7 (HMM E-Value=2.7)
          Length = 481

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 167 WIRSKIPFCILRMGVICLK 223
           WIR+++ F +LR  ++CL+
Sbjct: 132 WIRARVSFALLRSALVCLR 150


>SB_13192| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = +1

Query: 178 KDTFLYFA---YGSNLFKKRIRINNPTA-EFLGVGRLDNHQLDFIKYSEHWRGASATIIP 345
           K  FL F    YG+  F + +   +    EF  +  ++  ++  +K  EH +     ++ 
Sbjct: 36  KAVFLLFESWIYGTGTFGRVLLARDRRGGEFYALKIMNISEVIRLKQVEHVQNEKNILMS 95

Query: 346 TEHAHVWGAIWXLHDQ 393
            EH  +   +W  HDQ
Sbjct: 96  IEHPFIVNLLWTQHDQ 111


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,823,088
Number of Sequences: 59808
Number of extensions: 298372
Number of successful extensions: 467
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)