BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_H22
(593 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY062208-1|AAL58569.1| 503|Anopheles gambiae cytochrome P450 CY... 24 4.3
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 23 5.6
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 7.4
AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid transpo... 23 7.4
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 23 9.8
AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450 CY... 23 9.8
>AY062208-1|AAL58569.1| 503|Anopheles gambiae cytochrome P450
CYP6M1 protein.
Length = 503
Score = 23.8 bits (49), Expect = 4.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 485 TETPSEVITFTDLAKYQFV 429
TE P E +TF ++A FV
Sbjct: 281 TENPEEALTFNEVAAQAFV 299
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.4 bits (48), Expect = 5.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 394 LDHVVSILLPKHGHVQW 344
L+H+VS L P+H + W
Sbjct: 379 LEHIVSDLFPQHPPLVW 395
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.0 bits (47), Expect = 7.4
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
Frame = -3
Query: 255 LSCWIVDTDT--FFKQI 211
LSCW++D D FKQ+
Sbjct: 1070 LSCWVLDADARPTFKQL 1086
>AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid
transporter Ag_AAT8 protein.
Length = 636
Score = 23.0 bits (47), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 465 HNIYRFSKIPVCINTFLSV 409
HN+YR + I I+TF S+
Sbjct: 356 HNVYRDATIVTSIDTFTSL 374
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 468 SHNIYRFSKIPVCINTFLSV**W 400
+H I RFSKI C + L++ W
Sbjct: 119 NHRIDRFSKIYCCSHLCLAIFYW 141
>AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450
CYP6S2 protein.
Length = 504
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 493 RTYQQTINPPLRKNGEELPLERRPCITYLXCII 591
R ++ + L K+G E+ E + YL C+I
Sbjct: 327 RKARKCVRSTLAKHGNEMTYEAIKDMYYLECVI 359
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,297
Number of Sequences: 2352
Number of extensions: 10029
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -