Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_H22
         (593 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019243-1|AAH19243.1|  188|Homo sapiens chromosome 7 open readi...   103   4e-22
BC013937-1|AAH13937.1|  188|Homo sapiens chromosome 7 open readi...   103   4e-22
BC000625-1|AAH00625.1|  188|Homo sapiens chromosome 7 open readi...   103   4e-22
BC005356-1|AAH05356.1|  114|Homo sapiens C7orf24 protein protein.      80   5e-15

>BC019243-1|AAH19243.1|  188|Homo sapiens chromosome 7 open reading
           frame 24 protein.
          Length = 188

 Score =  103 bits (248), Expect = 4e-22
 Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
 Frame = +1

Query: 139 MLNSFSRKMMDPIKDTFLYFAYGSNLFKKRIRINNPTAEFLGVGRLDNHQLDFI----KY 306
           M NS  + +  P +++FLYFAYGSNL  +RI + NP+A F  V RL + +LDF     K 
Sbjct: 1   MANSGCKDVTGPDEESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKT 60

Query: 307 SEHWRGASATIIPTEHAHVWGAIWXLHDQDLPSLXRQEXVDTNWYFAKSVNVMTSDGVSV 486
           S+ W G  ATI  +    VWG +W ++  +L SL  QE V +  Y    V V T +G  +
Sbjct: 61  SQTWHGGIATIFQSPGDEVWGVVWKMNKSNLNSLDEQEGVKSGMYVVIEVKVATQEGKEI 120

Query: 487 QCRTYQQT 510
            CR+Y  T
Sbjct: 121 TCRSYLMT 128


>BC013937-1|AAH13937.1|  188|Homo sapiens chromosome 7 open reading
           frame 24 protein.
          Length = 188

 Score =  103 bits (248), Expect = 4e-22
 Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
 Frame = +1

Query: 139 MLNSFSRKMMDPIKDTFLYFAYGSNLFKKRIRINNPTAEFLGVGRLDNHQLDFI----KY 306
           M NS  + +  P +++FLYFAYGSNL  +RI + NP+A F  V RL + +LDF     K 
Sbjct: 1   MANSGCKDVTGPDEESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKT 60

Query: 307 SEHWRGASATIIPTEHAHVWGAIWXLHDQDLPSLXRQEXVDTNWYFAKSVNVMTSDGVSV 486
           S+ W G  ATI  +    VWG +W ++  +L SL  QE V +  Y    V V T +G  +
Sbjct: 61  SQTWHGGIATIFQSPGDEVWGVVWKMNKSNLNSLDEQEGVKSGMYVVIEVKVATQEGKEI 120

Query: 487 QCRTYQQT 510
            CR+Y  T
Sbjct: 121 TCRSYLMT 128


>BC000625-1|AAH00625.1|  188|Homo sapiens chromosome 7 open reading
           frame 24 protein.
          Length = 188

 Score =  103 bits (248), Expect = 4e-22
 Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
 Frame = +1

Query: 139 MLNSFSRKMMDPIKDTFLYFAYGSNLFKKRIRINNPTAEFLGVGRLDNHQLDFI----KY 306
           M NS  + +  P +++FLYFAYGSNL  +RI + NP+A F  V RL + +LDF     K 
Sbjct: 1   MANSGCKDVTGPDEESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKT 60

Query: 307 SEHWRGASATIIPTEHAHVWGAIWXLHDQDLPSLXRQEXVDTNWYFAKSVNVMTSDGVSV 486
           S+ W G  ATI  +    VWG +W ++  +L SL  QE V +  Y    V V T +G  +
Sbjct: 61  SQTWHGGIATIFQSPGDEVWGVVWKMNKSNLNSLDEQEGVKSGMYVVIEVKVATQEGKEI 120

Query: 487 QCRTYQQT 510
            CR+Y  T
Sbjct: 121 TCRSYLMT 128


>BC005356-1|AAH05356.1|  114|Homo sapiens C7orf24 protein protein.
          Length = 114

 Score = 80.2 bits (189), Expect = 5e-15
 Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
 Frame = +1

Query: 139 MLNSFSRKMMDPIKDTFLYFAYGSNLFKKRIRINNPTAEFLGVGRLDNHQLDF----IKY 306
           M NS  + +  P +++FLYFAYGSNL  +RI + NP+A F  V RL + +LDF     K 
Sbjct: 1   MANSGCKDVTGPDEESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKT 60

Query: 307 SEHWRGASATIIPTEHAHVWGAIWXLHDQDLPSL 408
           S+ W G  ATI  +    VWG +W ++  +L SL
Sbjct: 61  SQTWHGGIATIFQSPGDEVWGVVWKMNKSNLNSL 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,892,636
Number of Sequences: 237096
Number of extensions: 1423484
Number of successful extensions: 1660
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)