Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_H20
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 246 5e-64
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 227 1e-58
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 203 3e-51
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 176 3e-43
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 161 2e-38
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 143 3e-33
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 139 6e-32
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 136 4e-31
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 132 5e-30
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 132 9e-30
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 131 2e-29
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 105 9e-22
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 91 2e-17
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 85 1e-15
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 82 1e-14
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 77 4e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 68 2e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 68 2e-10
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 62 1e-08
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 61 2e-08
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 61 3e-08
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 60 6e-08
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 58 2e-07
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 52 1e-05
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 52 2e-05
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 51 2e-05
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 51 3e-05
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 50 4e-05
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 48 1e-04
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 48 3e-04
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 46 8e-04
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 44 0.002
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 42 0.013
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 42 0.017
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 36 0.85
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 3.4
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 4.5
UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR fam... 33 7.9
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 33 7.9
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 246 bits (601), Expect = 5e-64
Identities = 115/156 (73%), Positives = 136/156 (87%)
Frame = +2
Query: 179 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 358
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 359 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 538
MVKKWQTLIE ++DV TTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ I KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 539 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPL 646
I R++T+++L+ VV KL+PDSIAKDIEKAC +YPL
Sbjct: 175 IKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPL 210
Score = 79.4 bits (187), Expect = 7e-14
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +1
Query: 25 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIE 204
GK K + KK KK+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQ + ++
Sbjct: 4 GKNKGVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLK 63
Query: 205 GKSF 216
G+ F
Sbjct: 64 GRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 227 bits (556), Expect = 1e-58
Identities = 113/163 (69%), Positives = 130/163 (79%)
Frame = +2
Query: 158 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 337
L T TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 338 LTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 517
LT DK+ MVKKWQT+IEA++DV TTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 518 XKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPL 646
KKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 25 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIE 204
GK K + KK KK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQ + ++
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 205 GKSF 216
G+ F
Sbjct: 64 GRVF 67
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 203 bits (496), Expect = 3e-51
Identities = 100/157 (63%), Positives = 122/157 (77%)
Frame = +2
Query: 179 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 358
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 359 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 538
+V+KWQTLIEA++DV TTD Y LR+FCI FT K +KTCYAQ +Q+R I +KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 539 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 649
+T T+ +L+E+V K IP+SI ++IEKA IYPL+
Sbjct: 567 MTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQ 603
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +1
Query: 25 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQ 174
GK K + KK KK DPF +KDWYD+KAPS+F R VG TLV+RTQ
Sbjct: 399 GKNKRISKG-KKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQ 447
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 176 bits (429), Expect = 3e-43
Identities = 85/156 (54%), Positives = 114/156 (73%)
Frame = +2
Query: 182 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 361
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 362 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEII 541
+V+KWQ+LIEAN+ V TTD Y+LR+F I T + +KT YA +Q+RAI +KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 542 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 649
R+ + L+++ NKLIP+ I ++IEKA GIYPL+
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQ 208
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +1
Query: 25 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIE 204
GK K + KK L KK DPF RKDWY +KAP+ F+ R VG TLVNR+ +N ++
Sbjct: 4 GKNKRLSKG-KKGLKKKTQDPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALK 62
Query: 205 GKSF 216
G+ F
Sbjct: 63 GRIF 66
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 161 bits (390), Expect = 2e-38
Identities = 80/142 (56%), Positives = 108/142 (76%)
Frame = +2
Query: 179 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 358
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 359 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 538
++ KW TLIE +DV TTDGY LRVF I FT K ++KT YA+ ++V+AI KKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 539 ITRDVTNSELREVVNKLIPDSI 604
+T V++++L+ VV+ LI S+
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSL 192
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +1
Query: 73 KIVDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQXNENCFGRIEGKSF 216
K VDPFTRK+WY V+AP+ F K +VG T VNRTQ + ++G+ +
Sbjct: 14 KKVDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 143 bits (347), Expect = 3e-33
Identities = 73/167 (43%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = +2
Query: 158 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 337
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 338 LTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 508
+T D+L M++KWQTLIEA +D T DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 509 RAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 649
RAI +K+ IT + + E LI + K IEK I+PL+
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQ 214
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +1
Query: 55 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSFRS 222
KK K+ +DP +RK+WYD +AP FS + G TLV ++ N I+G+ S
Sbjct: 15 KKGAKKRTIDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVES 70
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 139 bits (336), Expect = 6e-32
Identities = 67/157 (42%), Positives = 104/157 (66%)
Frame = +2
Query: 179 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 358
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 359 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 538
M+KK QTLIE ++ + DGY+LR+F I FT QRKT YAQ +Q++ I KK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 539 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 649
+ ++V+ + +++ +S+AK+I KA I+PL+
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQ 207
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 55 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGK 210
KK KK +DP RK+W+++ AP F+ G T +N++ I+G+
Sbjct: 11 KKKGQKKTIDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 136 bits (329), Expect = 4e-31
Identities = 66/127 (51%), Positives = 85/127 (66%)
Frame = +2
Query: 266 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCI 445
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DV TTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 446 GFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 625
FT K Q+ YAQ T+++ + ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 626 CHGIYPL 646
I+PL
Sbjct: 126 ASSIFPL 132
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 132 bits (320), Expect = 5e-30
Identities = 69/146 (47%), Positives = 97/146 (66%)
Frame = +2
Query: 179 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 358
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 359 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 538
+VKKW TLIE ++DV TTDG+++R+FCIGFT++ S +KT YA+ Q++ I K M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 539 ITRDVTNSELREVVNKLIPDSIAKDI 616
IT++ + EL + V+ L + K +
Sbjct: 174 ITKEAASRELTQFVDYLKKTNFQKKL 199
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 22 SGKIKACRRA-VKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGR 198
+GK K + VKK +KI +PF++K+WY+VK P F +R VG +VN+T +
Sbjct: 3 TGKNKKYKAGNVKKGSKRKIAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQ 62
Query: 199 IEGK 210
++G+
Sbjct: 63 LKGR 66
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 132 bits (318), Expect = 9e-30
Identities = 58/157 (36%), Positives = 100/157 (63%)
Frame = +2
Query: 179 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 358
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 359 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 538
+++KW T +E ++V T DGY +R+F + FT + Q + CYA+ V+ + ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 539 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 649
I R ++ +++E V+ L + ++ + + C+ I PLR
Sbjct: 175 IKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLR 211
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1
Query: 25 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIE 204
GK K + K+ K + RK+WYDV AP+ F KRQ T+ N+TQ +
Sbjct: 4 GKNKRISKGGKRGKRGKAQETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLR 63
Query: 205 GKSFRS 222
G+ F +
Sbjct: 64 GRVFEA 69
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 131 bits (316), Expect = 2e-29
Identities = 75/157 (47%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Frame = +2
Query: 179 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 358
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 359 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQVRAIXKKMCE 535
V KWQ ++EA+ DV T D Y+L +FC+G+T N + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 536 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPL 646
I+ D ++L+EV+NKL+PD++ KD+EKAC IYPL
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPL 190
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 94 RKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSFRS 222
+KD YDVKA +MF+ R +G T V R Q + + G F +
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEA 54
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 105 bits (252), Expect = 9e-22
Identities = 53/148 (35%), Positives = 88/148 (59%)
Frame = +2
Query: 206 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 385
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 386 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 565
IEA D+ DG V RVF +G T + +KTCY +H+ + I K M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 566 LREVVNKLIPDSIAKDIEKACHGIYPLR 649
+++++ KL +++ K IE+ I+PL+
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQ 160
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 91.5 bits (217), Expect = 2e-17
Identities = 45/152 (29%), Positives = 83/152 (54%)
Frame = +2
Query: 191 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 370
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 371 KWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRD 550
KW TLIE ++ T DGY L++F I + K + KT Y +Q RA+ +++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 551 VTNSELREVVNKLIPDSIAKDIEKACHGIYPL 646
N ++++ ++++ I + IE C I+P+
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKIFPI 203
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/142 (31%), Positives = 74/142 (52%)
Frame = +2
Query: 164 TVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLT 343
T ++A++ + RV+EV+L DL + KF L + V L NFHGMD+T
Sbjct: 47 TKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDIT 106
Query: 344 TDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXK 523
K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +
Sbjct: 107 RHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRA 166
Query: 524 KMCEIITRDVTNSELREVVNKL 589
+ E + ++ + +V KL
Sbjct: 167 GIYETLHNELGKVSIPVLVTKL 188
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 55 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRT 171
KK+ +K DP+ +K+WY V AP+ F R +G T V +T
Sbjct: 11 KKITQRKNPDPYLKKEWYPVIAPAHFKSRHIGQTPVTKT 49
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 81.8 bits (193), Expect = 1e-14
Identities = 46/152 (30%), Positives = 80/152 (52%)
Frame = +2
Query: 182 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 361
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 362 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEII 541
+++K++T+I+A++D T DG++LR+F IGFT K + S + YA + R + M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 542 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI 637
T + + ++ + + I +I + C I
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEIVEKCKQI 200
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +2
Query: 158 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 337
L T TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 338 LTTDKLRWMVKK 373
LT+DK+ ++K
Sbjct: 102 LTSDKITSQIRK 113
Score = 69.7 bits (163), Expect = 6e-11
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +2
Query: 515 IXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPL 646
I KKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPL 154
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +1
Query: 28 KIKACRRAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQ 174
K K + KK KK+VDPF++KDWYDV AP+MF+ R +G TLV RTQ
Sbjct: 5 KNKRLTKGGKKGAKKKVVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQ 53
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2
Query: 158 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 337
L T TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 338 LTTD 349
L+ D
Sbjct: 105 LSCD 108
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +1
Query: 46 RAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 216
R+ KK KK VD ++KDWYD+KAP+MF+ R +G TLV RTQ + ++G F
Sbjct: 11 RSSKKGAKKKAVDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 67.7 bits (158), Expect = 2e-10
Identities = 45/148 (30%), Positives = 75/148 (50%)
Frame = +2
Query: 206 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 385
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 386 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 565
I+AN+ V T DG+ +RV I T K A+ +Q+ +I + M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 566 LREVVNKLIPDSIAKDIEKACHGIYPLR 649
E +N+++ +A +I K IYPLR
Sbjct: 153 FTEFINEVVTGKVASEIYKNTKNIYPLR 180
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 73 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVN 165
K VD F K+WY V AP+ F++ +G TL +
Sbjct: 7 KKVDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 62.1 bits (144), Expect = 1e-08
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Frame = +2
Query: 194 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 373
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 374 WQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDV 553
+ I+ IDV T DGY +RV + FT T A+ +Q RAI K+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 554 TNSELREVVNKLI----PDSIAKDIEKACHGIYPLR 649
+ E + + + +SI + I++A IYP+R
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIR 178
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 61.3 bits (142), Expect = 2e-08
Identities = 45/148 (30%), Positives = 70/148 (47%)
Frame = +2
Query: 206 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 385
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 386 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 565
I+ +V T+DGY +RV + ++ S KT I KK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 566 LREVVNKLIPDSIAKDIEKACHGIYPLR 649
E V +I D +++ K IYP+R
Sbjct: 158 FSEYVKYIISDDAPRELSKELKVIYPVR 185
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 60.9 bits (141), Expect = 3e-08
Identities = 45/150 (30%), Positives = 76/150 (50%)
Frame = +2
Query: 200 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 379
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 380 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTN 559
+ I+AN+DV T DG+V+RV FT K A+ +Q++AI + M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 560 SELREVVNKLIPDSIAKDIEKACHGIYPLR 649
++ + + I ++ I + IYPLR
Sbjct: 152 TDFETFMQEAILGRLSAAIYRQAKFIYPLR 181
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 59.7 bits (138), Expect = 6e-08
Identities = 42/148 (28%), Positives = 70/148 (47%)
Frame = +2
Query: 206 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 385
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 386 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 565
IE +DV T DGY LRV + FT + + KT +Q RAI M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 566 LREVVNKLIPDSIAKDIEKACHGIYPLR 649
+ + + + + +I K IYP+R
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKKIYPIR 184
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 58.0 bits (134), Expect = 2e-07
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Frame = +2
Query: 200 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 379
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 380 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTN 559
+ + +V T DGY LRV + FT R+ C + +Q AI K M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 560 SELREVVNKLI----PDSIAKDIEKACHGIYPLR 649
S L E++ ++ S+A I+++ IYPLR
Sbjct: 149 STLDELIQLMVFSDHEGSLAYLIDESARKIYPLR 182
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 52.0 bits (119), Expect = 1e-05
Identities = 36/148 (24%), Positives = 67/148 (45%)
Frame = +2
Query: 206 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 385
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 386 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 565
+EA I V TTD Y +++ + T K A +Q +AI + M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 566 LREVVNKLIPDSIAKDIEKACHGIYPLR 649
++++ ++ ++ I IYPLR
Sbjct: 151 FEQLIDSVVEGRLSSAIYGEAKDIYPLR 178
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1
Query: 25 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTT 156
GK K + KK KK++D F++KDWYDVKA +MF+ R +G T
Sbjct: 4 GKNKCFMKGSKKGAKKKVIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 51.2 bits (117), Expect = 2e-05
Identities = 39/150 (26%), Positives = 70/150 (46%)
Frame = +2
Query: 200 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 379
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 380 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTN 559
+ I A ++V T DG+ +RV + T + K T++R +M +II
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHK------TEIRV---RMEQIIKEMAKE 157
Query: 560 SELREVVNKLIPDSIAKDIEKACHGIYPLR 649
+ E V+ ++ + I C ++PL+
Sbjct: 158 TPFAEFVHAMLMGGLGSKIYGDCKKMFPLK 187
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 50.8 bits (116), Expect = 3e-05
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Frame = +2
Query: 206 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 385
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 386 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIXKKMCEIITRDVTNS 562
I +D+ T DG+ LRV + T Y H Q I K M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 563 ELREVVNKLIPDSIAKDIEKACHGIYPLR 649
E V ++I ++A +I I PLR
Sbjct: 158 TFDEFVQEMIFGNLANNIFNEAKKIAPLR 186
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 50.4 bits (115), Expect = 4e-05
Identities = 39/148 (26%), Positives = 66/148 (44%)
Frame = +2
Query: 206 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 385
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 386 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 565
+EA+I V TTD Y +RV + T K A +Q +AI + M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 566 LREVVNKLIPDSIAKDIEKACHGIYPLR 649
V+ ++ +++ I IYPLR
Sbjct: 151 FESFVDAIVEGNLSSAIYGDAKLIYPLR 178
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 48.4 bits (110), Expect = 1e-04
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Frame = +2
Query: 194 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 373
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 374 WQTLIEANIDVXTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRD 550
+ +++ I V L+V FT +A+ +QV+ + KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 551 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 649
++ V+ ++ ++K + C I+P+R
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPIFPVR 184
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 47.6 bits (108), Expect = 3e-04
Identities = 39/152 (25%), Positives = 69/152 (45%)
Frame = +2
Query: 194 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 373
E +KGR+ + +L ++ D + F+ IAE V G F G ++T D LR +VK+
Sbjct: 42 ETVKGRIMQATLGEITNDYAKQHIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKR 99
Query: 374 WQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDV 553
+ I+ ++ V T D +R+ ++S A Q A+ + +
Sbjct: 100 RSSRIDCHVQVVTKDNKKVRL---------TISCYTFARANIAQEHALRNAITAGLVAQA 150
Query: 554 TNSELREVVNKLIPDSIAKDIEKACHGIYPLR 649
+L +VN ++ I+KD+ K +YP R
Sbjct: 151 QAWDLNTLVNGVVSGEISKDLFKLVKTLYPTR 182
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 46.0 bits (104), Expect = 8e-04
Identities = 36/154 (23%), Positives = 73/154 (47%)
Frame = +2
Query: 188 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 367
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 368 KKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITR 547
++++ I+ IDV T DGY++R+ + T K Q + ++I K +++
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK---------RVQTSVKQSIRAKTRDVLLG 158
Query: 548 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 649
V + + ++ S+ +I+ IYP R
Sbjct: 159 YVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCR 192
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +2
Query: 581 NKLIPDSIAKDIEKACHGIYPL 646
NKLIPDSI KDIEKAC IYPL
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPL 22
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 41.9 bits (94), Expect = 0.013
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Frame = +2
Query: 209 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 385
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 386 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 565
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 566 LREVVNKLIPDSIAKDIEKACHGIYPLR 649
+ + D I I++ + P++
Sbjct: 178 IDFIYKICCSDVIGNSIKRRSKRVIPIK 205
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 41.5 bits (93), Expect = 0.017
Identities = 24/93 (25%), Positives = 48/93 (51%)
Frame = +2
Query: 203 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 382
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 383 LIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRK 481
+ +DV T+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 35.9 bits (79), Expect = 0.85
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = -3
Query: 399 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 220
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 219 SKTLPFNPSEAIFVALG-TVDKRGADLPLAE-HRRSLDIVPIF 97
++ + E +A G T+D+ A + L H+ + D + +F
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNLPRLHQYNDDKITLF 202
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 35.1 bits (77), Expect = 1.5
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = -3
Query: 450 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 277
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 276 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVALG 169
L + + SV + S R S L F P EA+++A+G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 34.7 bits (76), Expect = 2.0
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +2
Query: 299 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQR 478
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 479 KTCYAQHTQVRAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 616
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -3
Query: 402 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 238
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 476 RKTCYAQHTQVRAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 622
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
>UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR
family; n=4; Corynebacterium|Rep: Bacterial regulatory
proteins, tetR family - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 191
Score = 32.7 bits (71), Expect = 7.9
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +2
Query: 332 MDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLR-VFCIGFTNKDSLSQRKTCYAQHTQV 508
+++ L W K Q LI+A T Y+L V + S+S ++TC A+ +
Sbjct: 37 LNVAPGALYWHFKNKQELIDA------TSRYLLAPVLGRNDEQRASISAQETC-AEMRSL 89
Query: 509 RAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 619
K E+I+ ++N +LR+ + LI DS+ + E
Sbjct: 90 MMQTKDGAEVISAALSNQQLRQELESLISDSLKEPNE 126
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 288 PNMCK-DVMCSATSTAWTSQPISSGGWLKNGRL--SSKPTLM*XQPMDTFYVSSALVSPI 458
P CK + WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1631 PGKCKLHAWLIIQNRVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,807,239
Number of Sequences: 1657284
Number of extensions: 13313034
Number of successful extensions: 38549
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 37284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38531
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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