Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_H19
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   1.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.6  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 120 IVLRIERHLD*DVSICHTNKKPNSSRKNSRCDELTK 13
           ++  IE+H     ++CH   +PN S  N++ D L K
Sbjct: 126 VLKSIEKHQG---AVCHLETRPNQS-DNNQLDALVK 157


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 514 SCCVCPCDVXYV 479
           SC VC CD  Y+
Sbjct: 773 SCTVCTCDAKYL 784


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 195 INKICPLSRIIEQCVILLHKTFTDCIVL 112
           +NKIC L   + + V L ++TF   ++L
Sbjct: 502 LNKICALHHHLSKLVKLFNETFGIVLLL 529


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 195 INKICPLSRIIEQCVILLHKTFTDCIVL 112
           +NKIC L   + + V L ++TF   ++L
Sbjct: 227 LNKICALHHHLSKLVKLFNETFGIVLLL 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,445
Number of Sequences: 336
Number of extensions: 2719
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)