Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_H19
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for ... 56 1e-07
U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor ... 56 1e-07
CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein. 56 1e-07
BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport facto... 56 1e-07
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 33 0.76
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 33 0.76
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 33 0.76
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 33 0.76
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 33 0.76
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 31 2.3
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 31 4.1
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 31 4.1
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 31 4.1
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 31 4.1
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 31 4.1
>X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for
PP15 (placental protein 15). ).
Length = 127
Score = 55.6 bits (128), Expect = 1e-07
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLGDS 439
I+EKL+SL FQKI +TA D QP D DE P + Q F+LK + D+
Sbjct: 52 IVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDA 111
Query: 440 FYVQHDIFRLGIH 478
+ +D+FRL +H
Sbjct: 112 WVCTNDMFRLALH 124
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 97 MALNPQYDAIGKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQG 249
M P ++ IG F+Q YY LFD+ R L +Y ++ S +T+EG Q QG
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDN--DRTQLGAIY-IDASCLTWEGQQFQG 48
>U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 55.6 bits (128), Expect = 1e-07
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLGDS 439
I+EKL+SL FQKI +TA D QP D DE P + Q F+LK + D+
Sbjct: 52 IVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDA 111
Query: 440 FYVQHDIFRLGIH 478
+ +D+FRL +H
Sbjct: 112 WVCTNDMFRLALH 124
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 97 MALNPQYDAIGKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQG 249
M P ++ IG F+Q YY LFD+ R L +Y ++ S +T+EG Q QG
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDN--DRTQLGAIY-IDASCLTWEGQQFQG 48
>CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein.
Length = 127
Score = 55.6 bits (128), Expect = 1e-07
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLGDS 439
I+EKL+SL FQKI +TA D QP D DE P + Q F+LK + D+
Sbjct: 52 IVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDA 111
Query: 440 FYVQHDIFRLGIH 478
+ +D+FRL +H
Sbjct: 112 WVCTNDMFRLALH 124
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 97 MALNPQYDAIGKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQG 249
M P ++ IG F+Q YY LFD+ R L +Y ++ S +T+EG Q QG
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDN--DRTQLGAIY-IDASCLTWEGQQFQG 48
>BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 55.6 bits (128), Expect = 1e-07
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLGDS 439
I+EKL+SL FQKI +TA D QP D DE P + Q F+LK + D+
Sbjct: 52 IVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDA 111
Query: 440 FYVQHDIFRLGIH 478
+ +D+FRL +H
Sbjct: 112 WVCTNDMFRLALH 124
Score = 40.3 bits (90), Expect = 0.005
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 97 MALNPQYDAIGKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQG 249
M P ++ IG F+Q YY LFD+ R L +Y ++ S +T+EG Q QG
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDN--DRTQLGAIY-IDASCLTWEGQQFQG 48
>BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 2 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLG-- 433
I K+ SL F + + VD+ P +MQTFVL P G
Sbjct: 61 IHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSV 120
Query: 434 -DSFYVQHDIFR 466
+ FYV +D+FR
Sbjct: 121 PNKFYVHNDMFR 132
>AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein
isoform G3BP-2a protein.
Length = 482
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLG-- 433
I K+ SL F + + VD+ P +MQTFVL P G
Sbjct: 61 IHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSV 120
Query: 434 -DSFYVQHDIFR 466
+ FYV +D+FR
Sbjct: 121 PNKFYVHNDMFR 132
>AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding
protein G3BP2 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLG-- 433
I K+ SL F + + VD+ P +MQTFVL P G
Sbjct: 61 IHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSV 120
Query: 434 -DSFYVQHDIFR 466
+ FYV +D+FR
Sbjct: 121 PNKFYVHNDMFR 132
>AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding
protein protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLG-- 433
I K+ SL F + + VD+ P +MQTFVL P G
Sbjct: 61 IHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSV 120
Query: 434 -DSFYVQHDIFR 466
+ FYV +D+FR
Sbjct: 121 PNKFYVHNDMFR 132
>AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein.
Length = 490
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 260 IMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLG-- 433
I K+ SL F + + VD+ P +MQTFVL P G
Sbjct: 69 IHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSV 128
Query: 434 -DSFYVQHDIFR 466
+ FYV +D+FR
Sbjct: 129 PNKFYVHNDMFR 140
>CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein.
Length = 466
Score = 31.5 bits (68), Expect = 2.3
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +2
Query: 257 KIMEKLNSLTFQKITRIVTAVDSQPMFDXXXXXXXXXXXXCDEXPPHLYMQTFVLKPLG- 433
+I K+ S F + VD+ + D +MQTFVL P G
Sbjct: 60 EIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNDNQALRRFMQTFVLAPEGS 119
Query: 434 --DSFYVQHDIFR 466
+ FYV +DIFR
Sbjct: 120 VANKFYVHNDIFR 132
>U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein
protein.
Length = 466
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 401 YMQTFVLKPLG---DSFYVQHDIFR 466
+MQTFVL P G + FYV +DIFR
Sbjct: 108 FMQTFVLAPEGSVANKFYVHNDIFR 132
>BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein protein.
Length = 466
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 401 YMQTFVLKPLG---DSFYVQHDIFR 466
+MQTFVL P G + FYV +DIFR
Sbjct: 108 FMQTFVLAPEGSVANKFYVHNDIFR 132
>BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 401 YMQTFVLKPLG---DSFYVQHDIFR 466
+MQTFVL P G + FYV +DIFR
Sbjct: 108 FMQTFVLAPEGSVANKFYVHNDIFR 132
>BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 401 YMQTFVLKPLG---DSFYVQHDIFR 466
+MQTFVL P G + FYV +DIFR
Sbjct: 108 FMQTFVLAPEGSVANKFYVHNDIFR 132
>AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein variant protein.
Length = 466
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 401 YMQTFVLKPLG---DSFYVQHDIFR 466
+MQTFVL P G + FYV +DIFR
Sbjct: 108 FMQTFVLAPEGSVANKFYVHNDIFR 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,954,516
Number of Sequences: 237096
Number of extensions: 1588860
Number of successful extensions: 2127
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2121
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -