Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_H16
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078157-11|AAG24070.1|  401|Caenorhabditis elegans Hypothetical...    28   4.9  
Z81575-8|CAB04634.1|  433|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U80840-1|AAK68304.1|  498|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U53139-11|AAK18936.2|  353|Caenorhabditis elegans Serpentine rec...    28   6.5  

>AF078157-11|AAG24070.1|  401|Caenorhabditis elegans Hypothetical
           protein F25E5.10 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +1

Query: 406 WVVSTSTPDLLFHHFSMKSXVYSNYNKLHSTRIYNLNNHGGINSRHSAR 552
           W V+   PD L H       + SN + +   R++  N   GI  RH+ +
Sbjct: 63  WTVALYIPDHLDHSVYTTGTLVSNRHIISYDRLFLTNTTDGIKLRHNLK 111


>Z81575-8|CAB04634.1|  433|Caenorhabditis elegans Hypothetical
           protein R08H2.9 protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 231 CQLGKCISIGTIPNILQH 284
           C+L KC+ +G  PN +QH
Sbjct: 141 CRLQKCLKVGMDPNAVQH 158


>U80840-1|AAK68304.1|  498|Caenorhabditis elegans Hypothetical
           protein F08D12.6 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +3

Query: 129 NEQNLXITYFIIFKELQQIENTNPHHXNIVRRIYCQLGKCISIGTIPNILQHCIKNHLF 305
           N+Q+  ITYF +F E   + N   H  N+    Y   G+  ++     +L +C K  LF
Sbjct: 347 NDQHKKITYFSLFPERHLMPNHKIHCLNLGSVSYELPGRGKNLQLDDVLLMNCSKLCLF 405


>U53139-11|AAK18936.2|  353|Caenorhabditis elegans Serpentine
           receptor, class w protein71 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = -2

Query: 541 VDYLFPHGCLSYISWYCVICCNLSTLCFSLKS 446
           ++Y+  +G +    +YC++  + S +CF+L S
Sbjct: 293 LNYVIGYGSVFISFFYCIVATSHSVICFALSS 324


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,080,096
Number of Sequences: 27780
Number of extensions: 280501
Number of successful extensions: 789
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)