Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_H06
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   0.54 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.54 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   2.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 164 LXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
           L R+N  F   + +N  P+ ++FHA W +  K    +L + IE +
Sbjct: 396 LLRHN--FNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEM 438


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 164 LXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
           L R+N  F   + +N  P+ ++FHA W +  K    +L + IE +
Sbjct: 403 LLRHN--FNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEM 445


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/57 (22%), Positives = 29/57 (50%)
 Frame = +2

Query: 47  LKSYDNCLMQYAKV*DRQLRNLASLKKAISTSLVHNETILXRNNEEFINKVMNNDKP 217
           LK+Y NCL+   +      +  +++ +A+ST        +  N  + ++ +++N KP
Sbjct: 38  LKNYVNCLLDKGRCTPEGKKLKSTIPEALSTDCAKCNEKVKANVRKVLHHLIDN-KP 93


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 170 RNNEEFINKVMNN 208
           +N  EFIN V+NN
Sbjct: 297 KNISEFINVVLNN 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,725
Number of Sequences: 336
Number of extensions: 2253
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)