Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_H06
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 41 2e-04
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 41 2e-04
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 38 0.001
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 37 0.002
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 33 0.027
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 31 0.19
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 27 1.8
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 1.8
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 7.2
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 40.7 bits (91), Expect = 2e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 191 NKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
N ++ DK +V+F+A+WC PCK L P L++L E
Sbjct: 29 NTRISADKVTVVDFYADWCGPCKYLKPFLEKLSE 62
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 98 QLRNLASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQL 277
++ NL + A S + + N+E +N+++ DK ++V F+A WC CK L P+
Sbjct: 2 KISNLLAAFLAFSGGFFCASAEVPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEY 61
Query: 278 KQLIEPL 298
+ + L
Sbjct: 62 ESAADEL 68
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
+ F + VM+ K V+V F+A WC CK L P ++L E
Sbjct: 363 DNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAE 400
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 173 NNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQ 283
++ EF ++ DK V+V+F A WC PCK + P+ +Q
Sbjct: 7 DSSEF-KSIVCQDKLVVVDFFATWCGPCKAIAPKFEQ 42
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 71 MQYAKV*D-RQLRNLASLKKAIST-SLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEW 244
+QY+ D L S K I +V ++ ++ F VM++ K V+V F+A+W
Sbjct: 110 VQYSNARDVDSLTQFVSEKTGIKKRKIVLPSNVVELDSLNFDKVVMDDKKDVLVEFYADW 169
Query: 245 CEPCKILTPQLKQL 286
C CK L P + L
Sbjct: 170 CGYCKRLAPTYETL 183
Score = 31.9 bits (69), Expect = 0.083
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 182 EFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
E N + + K ++ F+A WC CK L P ++L
Sbjct: 30 ELENTIRASKKGALIEFYATWCGHCKSLAPVYEEL 64
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 33.5 bits (73), Expect = 0.027
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 176 NEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPLH 301
N + K + P +V F+A WC CK L P ++L LH
Sbjct: 37 NSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLH 78
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 30.7 bits (66), Expect = 0.19
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 224 VNFHAEWCEPCKILTPQLKQL 286
V+ +A+WC PCK ++P QL
Sbjct: 24 VDCYADWCGPCKAISPLFSQL 44
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 327 HPQQLDL-GLCKGSISCFSCGVSILQGSHH 241
H +DL G C+GS++C +C V I+ H+
Sbjct: 546 HANNIDLEGACEGSVACSTCHV-IVDPEHY 574
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 182 EFINKVMNNDKP--VIVNFHAEWCEPCK 259
E +++ N K +++NF+A W PCK
Sbjct: 9 EQFQEILQNGKEQIILLNFYAPWAAPCK 36
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/64 (20%), Positives = 32/64 (50%)
Frame = +2
Query: 95 RQLRNLASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQ 274
++L L+S ++ + L+ + + E+ K ND +++N + +CE ++ +
Sbjct: 80 KELSELSSQTLSVQSQLLKVKNSIDSYKNEWSKKT--NDAQILLNSYETFCEEEALIEEK 137
Query: 275 LKQL 286
LK +
Sbjct: 138 LKNI 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,216,117
Number of Sequences: 5004
Number of extensions: 38166
Number of successful extensions: 96
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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