Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_H06
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 38 0.007
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 37 0.016
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 35 0.050
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 35 0.066
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 34 0.087
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 34 0.087
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 34 0.12
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 33 0.20
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 31 0.62
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 31 0.62
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 31 0.81
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 31 0.81
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 30 1.4
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 30 1.4
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 29 3.3
SB_45490| Best HMM Match : zf-U1 (HMM E-Value=0.51) 28 5.7
SB_21190| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 28 5.7
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +3
Query: 306 LDLAVVDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFIXLVETDMITCLINRMS 470
+DLA VD++ +L F V AVP VI +K G +++KF +VE I I +++
Sbjct: 24 VDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKFEGVVEPPQIRHFIEQLT 78
Score = 31.9 bits (69), Expect = 0.47
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 242 WCEPCKILTPQLKQLI 289
WC PCK+LTP+L +I
Sbjct: 2 WCNPCKVLTPRLDAII 17
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/34 (47%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Frame = +2
Query: 191 NKVMNN--DKPVIVNFHAEWCEPCKILTPQLKQL 286
N V+NN DK V+++F+AEWC PC+ + P+ K++
Sbjct: 22 NSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKM 55
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 110 LASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQ 274
LA + A S + E +L + F V N K V+V F+A WC CK L P+
Sbjct: 9 LALVSLAYSEEIKEEEDVLVLTEKNFDEAVAAN-KHVLVEFYAPWCGHCKALAPE 62
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
+ F N DK V V F+A WC CK L P QL E
Sbjct: 392 KNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGE 429
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 173 NNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
N++ F V+ ++ +V+F+A WC PC P+ +QL + L
Sbjct: 439 NSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML 480
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQ 283
E+F + V + +P V+F A WC PC L P+ ++
Sbjct: 292 EDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRK 326
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 137 TSLVHNETI-LXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
+SL + I L ++N ++V+N +K +V F+A WC CK L P +QL E
Sbjct: 17 SSLTQGKVIDLTKDN---FDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLGE 66
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 306 LDLAVVDVEXNADLXHTFEVKAVPAVIAIKNGLIVD 413
+DLA VD++ +L F V AVP VI +K G +++
Sbjct: 70 VDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVME 105
Score = 31.9 bits (69), Expect = 0.47
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 242 WCEPCKILTPQLKQLI 289
WC PCK+LTP+L +I
Sbjct: 48 WCNPCKVLTPRLDAII 63
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 35.1 bits (77), Expect = 0.050
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
E F V + K V++ F+A WC CK L P+ +L E L
Sbjct: 870 ENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKL 909
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 161 ILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
+L + F + V D ++V F A WC CK L P+ + E L
Sbjct: 540 VLDLGDSNFKSGVAGKDI-MLVEFFAPWCGHCKRLAPEYETAAEAL 584
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 164 LXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQL 277
L N E IN K V + F A WC PC+ TP+L
Sbjct: 158 LVNKNGEVINAGDLKGKIVGIYFSAHWCPPCRAFTPEL 195
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 119 LKKAISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
+ KA+ + L N ++ ++ + + + K V + F A WC PC+ TP+L + +
Sbjct: 1 MAKALESLLGKN--LVGKHGQISVESLSGEGKIVGLYFSAHWCPPCRGFTPKLVEFYQ 56
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 161 ILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTP 271
+L N++ F N+ + ++ V+V+F+A WC C+ L+P
Sbjct: 53 VLNLNDQNF-NETIKKNEYVLVDFYAPWCSDCQRLSP 88
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 158 TILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
T+L ++ F V + K V+V+F+A WC CK + P K + + L
Sbjct: 135 TLLELDDSNFEPAVQKH-KFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 34.3 bits (75), Expect = 0.087
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 212 KPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
K + V F A WC PC+ TP LK E L
Sbjct: 26 KVIAVYFSAHWCPPCRQFTPILKDFYEEL 54
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 194 KVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
+V+ N K V + F A WC PC+ TP LK E
Sbjct: 150 EVLQN-KVVAIYFSASWCPPCQKFTPLLKDFYE 181
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
+E +V+N + ++V F A WC CK L P+ ++ + L
Sbjct: 183 KENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQEL 222
Score = 32.7 bits (71), Expect = 0.27
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 176 NEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQ 274
N + ++V+ + ++V F+A WC CK L P+
Sbjct: 67 NSKNFDRVIEENNIILVEFYAPWCGHCKSLAPE 99
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 33.1 bits (72), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 212 KPVIVNFHAEWCEPCKILTPQLKQLIEPLH 301
K I++F A WC+PC++ P + L H
Sbjct: 178 KVTIIDFWASWCQPCRVENPAVVALYNEYH 207
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 31.5 bits (68), Expect = 0.62
Identities = 8/32 (25%), Positives = 22/32 (68%)
Frame = +2
Query: 191 NKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
+K + +++ ++F A WC PC+++ P+ +++
Sbjct: 5 DKFLKDNEVAAIDFTATWCGPCRMIGPKFEEM 36
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 200 MNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
+NN + V+V F+A WC CK P+ ++ E
Sbjct: 161 LNNTEHVLVMFYAPWCGHCKNAKPKYEKAAE 191
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 176 NEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLK 280
N + ++++ ++V+F+A WC C+ L PQL+
Sbjct: 26 NAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLE 60
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 176 NEEFINKVMN-NDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
+ +F ++ N K V+ +F A WC PCK + P L E
Sbjct: 15 DSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSE 54
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 137 TSLVHNETILXRNNEEFINKVMNN--DKPVIVNFHAEWCEPCKILTPQLKQL 286
+S+ N ++ ++ F + + + V+++F A WC PCK + P L
Sbjct: 2 SSMFGNGNVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNL 53
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 149 HNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQ 274
+ E ++ + F +V+N+ +V F A WC C+ L P+
Sbjct: 77 NKEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPE 118
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +2
Query: 131 ISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
I+ S E + ++ + + + + ++V+F+A WC C L P+ ++ L
Sbjct: 13 IAPSYARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQL 277
+ F + V+NND+ V++ F+ WC C P L
Sbjct: 525 DSFDDIVINNDQDVLLVFYTPWCGMCINFAPVL 557
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 161 ILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
+L + F + V D ++V F A WC CK L P+ + E L
Sbjct: 15 VLDLGDSNFKSGVAGKDI-MLVEFFAPWCGHCKRLAPEYETAAEAL 59
>SB_45490| Best HMM Match : zf-U1 (HMM E-Value=0.51)
Length = 477
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 200 MNNDKPVIVNFHAEWCEPCKILTPQLK 280
+ ND+ +VNFH + CE CK P K
Sbjct: 122 IKNDEGKVVNFHCKLCE-CKFNDPNAK 147
>SB_21190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 200 MNNDKPVIVNFHAEWCEPCKILTPQLK 280
+ ND+ +VNFH + CE CK P K
Sbjct: 122 IKNDEGKVVNFHCKLCE-CKFNDPNAK 147
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 212 KPVIVNFHAEWCEPCKILTPQL 277
K V+V F+A WC CK P+L
Sbjct: 213 KHVLVMFYAPWCGHCKKAKPEL 234
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQ 274
++ + + + V+V F+A WC CK + P+
Sbjct: 89 DDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPE 120
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,434,305
Number of Sequences: 59808
Number of extensions: 288018
Number of successful extensions: 682
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -