Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_H06
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 90  QTFAYCIRQLSYDFNHKSPN 31
           ++F + + +  YDFN++ PN
Sbjct: 645 RSFGFPLDKPLYDFNYEGPN 664


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 90  QTFAYCIRQLSYDFNHKSPN 31
           ++F + + +  YDFN++ PN
Sbjct: 645 RSFGFPLDKPLYDFNYEGPN 664


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 544 KRMVPSANKMFYCVTFC 594
           KRM P+AN  +Y   +C
Sbjct: 205 KRMRPAANWGYYAYPYC 221


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 386 SNKERINSGQVHXLSGNRYDHLS 454
           SN ER+  GQ   ++G+   HL+
Sbjct: 435 SNTERLQVGQYVTVNGDVVSHLN 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,960
Number of Sequences: 438
Number of extensions: 2736
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)