Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_H06
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 48 7e-06
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 46 2e-05
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 42 3e-04
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 42 3e-04
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 40 0.001
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 40 0.001
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 39 0.003
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 39 0.003
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 39 0.003
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 38 0.008
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 37 0.010
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 37 0.013
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 36 0.023
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 36 0.031
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 35 0.041
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 35 0.041
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 35 0.041
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 35 0.041
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 35 0.041
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 35 0.041
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 35 0.041
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 34 0.071
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 34 0.071
At4g31240.2 68417.m04435 expressed protein 34 0.094
At4g31240.1 68417.m04434 expressed protein 34 0.094
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 34 0.094
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 34 0.094
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 33 0.16
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 33 0.22
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 33 0.22
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 33 0.22
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 33 0.22
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 32 0.29
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 32 0.29
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 32 0.29
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 32 0.38
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 32 0.38
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 32 0.38
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 31 0.66
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 31 0.66
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 31 0.88
At4g12170.1 68417.m01934 thioredoxin family protein similar to S... 30 1.2
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 30 1.2
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 30 1.2
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 30 1.5
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 30 1.5
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 29 2.7
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 28 4.7
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 27 8.2
At4g11570.2 68417.m01855 haloacid dehalogenase-like hydrolase fa... 27 8.2
At4g11570.1 68417.m01854 haloacid dehalogenase-like hydrolase fa... 27 8.2
At4g01140.1 68417.m00152 expressed protein 27 8.2
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 27 8.2
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 27 8.2
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 27 8.2
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 27 8.2
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +2
Query: 98 QLRNLASLKKAISTSLVHNETILXRNNE---EFINKVMNNDKPVIVNFHAEWCEPCKILT 268
Q+R S++ S++ T+ + F + + N+DKPV+V+F+A WC PC+++
Sbjct: 36 QIRRFGSVQSPSSSTRFAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMV 95
Query: 269 PQLKQLIEPL 298
P L ++ E L
Sbjct: 96 PILNEVSETL 105
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 321 VDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKF 419
+D E L + ++++A+P I K+G + D+F
Sbjct: 114 IDTEKYPSLANKYQIEALPTFILFKDGKLWDRF 146
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 46.0 bits (104), Expect = 2e-05
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
+ F + ++N+DKPV+V+++A WC PC+ + P L ++ E L
Sbjct: 71 DSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETL 110
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 173 NNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
++ E+ KV+ +D PV+V F A WC PC+++ P + QL
Sbjct: 92 SDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQL 129
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 134 STSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
S+S++ I EF + V+ + +PV+V F A WC PCK++ P ++ L
Sbjct: 62 SSSVIRCGGIKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEAL 112
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 152 NETILXRNNEEFIN---KVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
N +L ++ EEFIN K + P + F A WC PC+ ++P + +L
Sbjct: 84 NGVVLVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVEL 131
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 173 NNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
N+ + + V+ D+PV V+F A WC PCK++ P + +L +
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQ 119
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +2
Query: 188 INKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
+N + + +K +++ F A+WC PCK L P+L++L
Sbjct: 52 LNALKDTNKLLVIEFTAKWCGPCKTLEPKLEEL 84
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 300 TDLDLAVVDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFIXLVETDMITCLINR 464
TD++ +DV+ + F + +PA++ +K G VD + V+ D + +N+
Sbjct: 89 TDVEFVKIDVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVG-VKVDELERKLNK 142
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 38.7 bits (86), Expect = 0.003
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +2
Query: 209 DKPVIVNFHAEWCEPCKILTPQLKQLIE 292
DK V+++ + +WC PCK++ P+ K+L E
Sbjct: 97 DKIVVLDMYTQWCGPCKVIAPKYKELSE 124
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 38.7 bits (86), Expect = 0.003
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 194 KVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
+ ++N KP +V F+A+WCE C+ L P + ++
Sbjct: 133 EALSNGKPTVVEFYADWCEVCRELAPDVYKI 163
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 110 LASLKKAISTSLVHNET-ILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
++ L++A+ T I N+ + + V+ PV+V+F A WC PCK++ P + L
Sbjct: 64 VSRLRRAVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDL 123
Query: 287 IE 292
+
Sbjct: 124 AQ 125
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 185 FINKVMNNDKPVIVNFHAEWCEPCKILTP 271
F +KV+N++ V+V F A WC CK LTP
Sbjct: 40 FKSKVLNSNGVVLVEFFAPWCGHCKALTP 68
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 173 NNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
N F + V+ +++ IV F A WC CK L P+ K+ + L
Sbjct: 168 NASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNL 209
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 161 ILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
+L F +KV+N++ V+V F A WC C+ LTP +++ L
Sbjct: 30 VLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTL 75
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 173 NNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQ 283
N+ F V + + IV F A WC CK L P+ K+
Sbjct: 169 NSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKK 205
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 35.9 bits (79), Expect = 0.023
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 209 DKPVIVNFHAEWCEPCKILTPQLKQLIE 292
+K V+++ + +WC PCK++ P+ K L E
Sbjct: 87 EKLVVLDMYTQWCGPCKVIAPKYKALSE 114
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 35.5 bits (78), Expect = 0.031
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +2
Query: 191 NKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
N++ ++K ++V+F A WC PC+++ P + + +
Sbjct: 41 NEIKESNKLLVVDFSASWCGPCRMIEPAIHAMAD 74
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 303 DLDLAVVDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFI 422
D+D +DV+ D+ F V A+P + +K G +++ I
Sbjct: 78 DVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERII 117
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 212 KPVIVNFHAEWCEPCKILTPQLKQLIE 292
K V+ NF A WC PCKI+ P +L E
Sbjct: 46 KIVVANFSATWCGPCKIVAPFFIELSE 72
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 300 TDLDLAVVDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFI 422
+ L +VDV+ +D ++++KA P +KNG + K +
Sbjct: 75 SSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLV 115
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 VHNETILXRNNEEFINKVMNNDK--PVIVNFHAEWCEPCKILTPQLKQL 286
V + ++ + + + + +++ D+ P+IV+F+A WC PC ++ +L+ L
Sbjct: 71 VREDYLVKKLSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEML 119
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
++ K + DK +V F+A WC CK L P+ ++L
Sbjct: 30 DDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKL 65
Score = 34.7 bits (76), Expect = 0.054
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 155 ETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
+ ++ + F V++ +K V+V F+A WC CK L P +++
Sbjct: 141 QNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKV 184
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
++ K + DK +V F+A WC CK L P+ ++L
Sbjct: 30 DDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKL 65
Score = 34.7 bits (76), Expect = 0.054
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 155 ETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
+ ++ + F V++ +K V+V F+A WC CK L P +++
Sbjct: 141 QNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKV 184
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 110 LASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
+A KK+ +NE + ++ + V+N+ K V++ F+A WC C+ L P L ++
Sbjct: 359 IAPHKKSQPIPAENNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEV 417
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 155 ETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
E +L ++ F + + +D ++V F+A WC CK L P+ ++ L
Sbjct: 30 EFVLTLDHTNFTDTINKHDF-IVVEFYAPWCGHCKQLAPEYEKAASAL 76
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 110 LASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
+A KK+ +NE + ++ + V+N+ K V++ F+A WC C+ L P L ++
Sbjct: 359 IAPHKKSQPIPAENNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEV 417
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 155 ETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
E +L ++ F + + +D ++V F+A WC CK L P+ ++ L
Sbjct: 30 EFVLTLDHTNFTDTINKHDF-IVVEFYAPWCGHCKQLAPEYEKAASAL 76
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 35.1 bits (77), Expect = 0.041
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 188 INKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
++K ++K ++++F A WC PC+++ P L
Sbjct: 21 LDKAKESNKLIVIDFTASWCPPCRMIAPIFNDL 53
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 321 VDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFIXLVETDM 443
VDV+ + F V+A+P + IK G +VDK + + D+
Sbjct: 66 VDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDL 106
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 34.3 bits (75), Expect = 0.071
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +2
Query: 95 RQLRNLASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKIL 265
R L + ++ + +S V + + + V+ ++ PV+V F+ WC PC+++
Sbjct: 46 RSLLSSSASRLRLSPLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMV 102
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 34.3 bits (75), Expect = 0.071
Identities = 10/39 (25%), Positives = 25/39 (64%)
Frame = +2
Query: 170 RNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
R + + + ++K ++++F A WC PCK + P+++++
Sbjct: 30 RQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREI 68
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 33.9 bits (74), Expect = 0.094
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 212 KPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
K + + F A WC PCK TP+L +L E L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPELIKLYENL 72
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 33.9 bits (74), Expect = 0.094
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 212 KPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
K + + F A WC PCK TP+L +L E L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPELIKLYENL 72
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 33.9 bits (74), Expect = 0.094
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 179 EEFINKVMN-NDKPVIVNFHAEWCEPCKILTPQL 277
E+F+N + + D+ VIV+F+ WC C+ + P+L
Sbjct: 102 EQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKL 135
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 33.9 bits (74), Expect = 0.094
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
EE I + ++ K ++VNF A WC P K + P ++L
Sbjct: 52 EEKITEANSHGKILVVNFKASWCLPSKTILPIYQEL 87
Score = 33.9 bits (74), Expect = 0.094
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 300 TDLDLAVVDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFI 422
T + +DVE A+ H + V A P V+ +K+G +DK +
Sbjct: 92 TSMIFVTIDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLV 132
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 33.1 bits (72), Expect = 0.16
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 212 KPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
K +++ F A WC PC+ TP+L ++ + +
Sbjct: 364 KTILMYFSAHWCPPCRAFTPKLVEVYKQI 392
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 164 LXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
L RN+ E + K + + F A WC PC+ TPQL ++ L
Sbjct: 28 LVRNDGEQVKVDSLLGKKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +2
Query: 173 NNEEFINKVMNN----DKPVIVNFHAEWCEPCKILTPQLKQL 286
NN E ++ V+++ +P+I+ + A WC C L P+L++L
Sbjct: 102 NNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKL 143
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 182 EFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
E + K + V+V+F A WC PC+ + P L + L
Sbjct: 19 EQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL 57
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 92 DRQLRNLASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTP 271
D Q +A KK+ +NE + E + V + K V++ F+A WC C+ L P
Sbjct: 351 DFQDGKVAVHKKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAP 410
Query: 272 QLKQL 286
L ++
Sbjct: 411 ILDEV 415
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 155 ETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPL 298
E +L ++ F + +D ++V F+A WC C+ L P+ ++ L
Sbjct: 29 EFVLTLDHSNFTETISKHDF-IVVEFYAPWCGHCQKLAPEYEKAASEL 75
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 161 ILXRNNEEF---INKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
++ ++ EF ++K + P + F A WC PC++++P + +L
Sbjct: 52 VVLKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILEL 96
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 NNEEFINKVMN-NDKPVIVNFHAEWCEPCKILTPQL 277
+ EEF++ + ++ VIV F+ WC C+ L P+L
Sbjct: 110 STEEFLSALSGAGERLVIVEFYGTWCASCRALFPKL 145
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 NNEEFINKVMN-NDKPVIVNFHAEWCEPCKILTPQL 277
+ EEF++ + ++ VIV F+ WC C+ L P+L
Sbjct: 110 STEEFLSALSGAGERLVIVEFYGTWCASCRALFPKL 145
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 152 NETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
N +I+ + F V+N+ + V++ H WC C+ L+ Q+++L
Sbjct: 416 NASIVTVVGKTFDGLVLNSRENVLLEVHTPWCVNCEALSKQIEKL 460
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQ 274
E V+ N++ V+V F+A WC C+ L P+
Sbjct: 110 ERNFTDVIENNQYVLVEFYAPWCGHCQSLAPE 141
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 179 EEFINKVMNNDKPVIVNFHAEWCEPCKILTPQ 274
E V+ N++ V+V F+A WC C+ L P+
Sbjct: 110 ERNFTDVIENNQYVLVEFYAPWCGHCQSLAPE 141
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 31.9 bits (69), Expect = 0.38
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 182 EFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
E + + K ++++F A WC PC+ + P ++
Sbjct: 18 EKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEM 52
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/41 (24%), Positives = 24/41 (58%)
Frame = +3
Query: 321 VDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFIXLVETDM 443
+DV+ + F+V+A+P + +K G I+D+ + + ++
Sbjct: 64 IDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEI 104
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 194 KVMNNDKPVIV-NFHAEWCEPCKILTPQLKQL 286
K N K +IV +F A WC PC+ + P L
Sbjct: 21 KAANESKKLIVIDFTATWCPPCRFIAPVFADL 52
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 158 TILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQL 277
T+L + F + + D + V+F+A WC CK L P+L
Sbjct: 33 TVLELTDSNFDSAISTFDC-IFVDFYAPWCGHCKRLNPEL 71
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 321 VDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFI 422
VDVE A+ + + V+A P V+ +K+G +DK +
Sbjct: 45 VDVEELAEFSNEWNVEATPTVVFLKDGRQMDKLV 78
>At4g12170.1 68417.m01934 thioredoxin family protein similar to
SP|Q9SEU6 Thioredoxin M-type 4, chloroplast precursor
(TRX-M4) {Arabidopsis thaliana}; contains Pfam profile:
PF00085 Thioredoxin
Length = 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 119 LKKAISTSLV-HNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
+K +S+SL H+ + + E+ + V+ + PVIV F A+ C C L P+L+ L
Sbjct: 11 IKAYVSSSLPSHDGLVQSLSASEWNSLVIQSKVPVIVVFIAKDCAECGSLMPELEFL 67
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 146 VHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQ 274
V + + + F V NN +V F+A WC C+ LTP+
Sbjct: 96 VDEKDVAVLTKDNFTEFVGNNSF-AMVEFYAPWCGACQALTPE 137
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 30.3 bits (65), Expect = 1.2
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +2
Query: 188 INKVMNNDKPVIVNFHAEWCEPCKILTPQLKQL 286
++ + ++ P ++N+ A WC C + P ++L
Sbjct: 36 LDDIKSSKSPAVINYGASWCGVCSQILPAFRKL 68
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 200 MNNDKP-VIVNFHAEWCEPCKILTPQLKQL 286
+N+ P V+V F A WC PC+ + P L ++
Sbjct: 223 LNSQTPHVMVMFTARWCGPCRDMIPILNKM 252
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 318 VVDVEXNADLXHTFEVKAVPAVIAIKNGLIVDKFI 422
+VDV+ ++ EVKA+P + +K+G +DK +
Sbjct: 60 IVDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLV 94
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 149 HNETILXRNNEEFINKVMN-NDKPVIVNFHAEWCEPCKILTPQLKQLIE 292
HN + N ++ ++N D+ V+++F++ C CK L P++ QL E
Sbjct: 85 HNMLEIQSANH-LVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAE 132
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 28.3 bits (60), Expect = 4.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 218 VIVNFHAEWCEPCKILTP 271
++VNF+A WC C +L P
Sbjct: 161 LVVNFYAPWCYWCNLLKP 178
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 271 WCQYFTGL-TPLRMEIHYHRFIIVHDL 194
W Y + L TPL + + Y R I VHDL
Sbjct: 916 WINYVSSLSTPLAIPLVYPRMISVHDL 942
>At4g11570.2 68417.m01855 haloacid dehalogenase-like hydrolase
family protein similar to genetic modifier [Zea mays]
GI:10444400; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase
Length = 373
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 98 QLRNLASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPV 220
Q+R +A K+ I +L L ++EF+N +MNN P+
Sbjct: 191 QVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPM 231
>At4g11570.1 68417.m01854 haloacid dehalogenase-like hydrolase
family protein similar to genetic modifier [Zea mays]
GI:10444400; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase
Length = 373
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 98 QLRNLASLKKAISTSLVHNETILXRNNEEFINKVMNNDKPV 220
Q+R +A K+ I +L L ++EF+N +MNN P+
Sbjct: 191 QVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPM 231
>At4g01140.1 68417.m00152 expressed protein
Length = 306
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 588 SNTIKHFVCGRNHSFKHYCVIVI 520
SNTI+++ C +S HY ++V+
Sbjct: 188 SNTIRNYECATTNSHGHYALVVL 210
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 16 SILEGIGRFVIKIIRQLSNAICKSLRSPAKESGIFE 123
S+L+ + R V+ + LSN K L KES IFE
Sbjct: 381 SVLKVLDRDVVAVSFNLSNETIKGLLKAQKESVIFE 416
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 131 ISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKIL 265
I LV E I E F +K+ D V F WC+ CK L
Sbjct: 18 IPIELVKAEVITL-TPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 131 ISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKIL 265
I LV E I E F +K+ D V F WC+ CK L
Sbjct: 18 IPIELVKAEVITL-TPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 131 ISTSLVHNETILXRNNEEFINKVMNNDKPVIVNFHAEWCEPCKIL 265
I LV E I E F +K+ D V F WC+ CK L
Sbjct: 18 IPIELVKAEVITL-TPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,304,820
Number of Sequences: 28952
Number of extensions: 189944
Number of successful extensions: 492
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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