Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_H03
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 290 2e-77
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 243 3e-63
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 221 9e-57
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 194 1e-48
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 191 1e-47
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 189 4e-47
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 169 7e-41
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 164 2e-39
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 163 4e-39
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 157 3e-37
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 149 4e-35
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 147 2e-34
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 134 2e-30
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 131 2e-29
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 123 4e-27
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 119 5e-26
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 116 5e-25
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 111 1e-23
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 111 2e-23
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 109 6e-23
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 108 1e-22
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 108 1e-22
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 108 1e-22
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 100 3e-20
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 100 6e-20
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 100 6e-20
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 97 2e-19
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 97 4e-19
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 93 7e-18
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 92 1e-17
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 91 2e-17
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 87 3e-16
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 84 2e-15
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 73 6e-12
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 59 1e-07
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 57 3e-07
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 57 4e-07
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 53 7e-06
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 52 9e-06
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 52 9e-06
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 52 1e-05
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 51 2e-05
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 50 4e-05
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 50 6e-05
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 48 1e-04
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 46 8e-04
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 46 0.001
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 46 0.001
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 44 0.003
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 43 0.006
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 43 0.007
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 42 0.013
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 42 0.017
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 41 0.022
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 40 0.039
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 40 0.052
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 40 0.068
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 40 0.068
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 39 0.090
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 39 0.090
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 39 0.090
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 39 0.12
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 38 0.16
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 38 0.16
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 38 0.28
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 37 0.36
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.36
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 37 0.36
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 37 0.48
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 36 0.64
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 36 0.84
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.9
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 34 2.6
UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19; Bacteri... 34 2.6
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 3.4
UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n... 34 3.4
UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1; Lentisph... 33 4.5
UniRef50_A3ICC8 Cluster: Dipicolinate synthase; n=1; Bacillus sp... 33 4.5
UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 4.5
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 5.9
UniRef50_Q5PA73 Cluster: 50S ribosomal protein L6; n=6; Anaplasm... 33 5.9
UniRef50_Q2S3P9 Cluster: 50S ribosomal protein L6; n=1; Saliniba... 33 5.9
UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6; Mycoplas... 33 7.8
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 290 bits (712), Expect = 2e-77
Identities = 140/186 (75%), Positives = 158/186 (84%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 270
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 271 SKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 450
+KKELAAVRTVCSH+ NMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 451 ITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVS 630
I RV+MAP VTVVNS QKDELI+EGN +E VS SAALIQQSTTV N DI KFLDGLYVS
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 631 EKTTVV 648
EKTTVV
Sbjct: 181 EKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 243 bits (594), Expect = 3e-63
Identities = 116/187 (62%), Positives = 146/187 (78%), Gaps = 2/187 (1%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 264
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 265 FGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 444
+G++KELA VRT+CSHV NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 445 KYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLY 624
KYI RV+M P V S QKDELI+EGN +E VS+SAALIQQ+TTV N DI KFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 625 VSEKTTV 645
VSEK TV
Sbjct: 181 VSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 221 bits (541), Expect = 9e-57
Identities = 104/186 (55%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWF 267
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 268 GSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 447
G+++ +AA+RT SHV N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 448 YITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYV 627
+ +V M VT++ S K KDEL+++GN +E VS SAALI Q V N DI KFLDG+YV
Sbjct: 121 KVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 180
Query: 628 SEKTTV 645
S+K T+
Sbjct: 181 SDKGTI 186
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 194 bits (474), Expect = 1e-48
Identities = 98/184 (53%), Positives = 127/184 (69%), Gaps = 2/184 (1%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 270
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 271 SKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPI--NCVTTEGNSIIEIRNFLGE 444
+K +AA+RTV S V NMI GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 445 KYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLY 624
K I V + VT+ S KDE+++ GNS+EDVS +AA +QQ V N DI KFLDG+Y
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
Query: 625 VSEK 636
VS K
Sbjct: 181 VSHK 184
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 191 bits (465), Expect = 1e-47
Identities = 94/184 (51%), Positives = 127/184 (69%)
Frame = +1
Query: 94 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 273
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGS 61
Query: 274 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 453
+K A +R+V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 454 TRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSE 633
+K P VTV S KDE+I+EGNSLE+VS SAA I+Q V N DI KFLDG+YVSE
Sbjct: 122 RVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSE 181
Query: 634 KTTV 645
+ +
Sbjct: 182 RGNI 185
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 189 bits (461), Expect = 4e-47
Identities = 83/170 (48%), Positives = 119/170 (70%)
Frame = +1
Query: 136 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 315
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 316 XNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAPXVTVVNS 495
NMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK + R+++ +T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 496 PKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEKTTV 645
K KDE+++ GNSLE +S S A IQ + + D+ KFLDG+YVSE+ +
Sbjct: 154 EKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 169 bits (410), Expect = 7e-41
Identities = 82/179 (45%), Positives = 109/179 (60%)
Frame = +1
Query: 100 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 279
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGK 61
Query: 280 ELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITR 459
A RT+CSH+ NM KGVT GF+YKMR YAHFPI + N IEIRNF+ + R
Sbjct: 62 RNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRR 121
Query: 460 VKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
++ P VT+ S KDELI+ G S+EDVS +AA I +S V N D+ KFLDG YVS +
Sbjct: 122 IECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 164 bits (398), Expect = 2e-39
Identities = 73/126 (57%), Positives = 94/126 (74%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 270
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 271 SKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 450
+KE+AA+RTVCSH+ NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 451 ITRVKM 468
+ V +
Sbjct: 121 VRPVPL 126
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 163 bits (395), Expect = 4e-39
Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 9/187 (4%)
Frame = +1
Query: 112 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 264
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 265 FGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 444
+G++++ A VRT+ SH+ NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGE
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGE 128
Query: 445 KYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLY 624
K ++M V V KDE+ +EGN +E VS SAA I + V N DI +FLDG+Y
Sbjct: 129 KRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVY 186
Query: 625 VSEKTTV 645
VSEK +
Sbjct: 187 VSEKCLI 193
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 157 bits (380), Expect = 3e-37
Identities = 83/192 (43%), Positives = 119/192 (61%), Gaps = 10/192 (5%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 243
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 244 LLKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIE 423
+ V W +K+ V +V S + NMI+GVT G+++KM YAHFPI +E
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVE 120
Query: 424 IRNFLGEKYITRVKMAPXVTVV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDI 600
I+NFLGEK I +K P VT+ N ++K+ L ++GN L +VS + ALI Q+ V N DI
Sbjct: 121 IKNFLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDI 180
Query: 601 XKFLDGLYVSEK 636
+FLDG+YVSEK
Sbjct: 181 RQFLDGIYVSEK 192
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 149 bits (362), Expect = 4e-35
Identities = 74/157 (47%), Positives = 100/157 (63%), Gaps = 3/157 (1%)
Frame = +1
Query: 187 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYK 357
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 358 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAPXVTVVNSPKQKDELIIEGNSL 537
MRAVYAHFPIN + EIRNFLGEK + + M VT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 538 EDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEKTTVV 648
+ VS SAAL+ +T V N DI KFLDG+Y + K TVV
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 201
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 147 bits (357), Expect = 2e-34
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 1/183 (0%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 267
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 268 GSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 447
KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEK 120
Query: 448 YITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYV 627
I ++ M V + + +KDE+ + G+ L VS +AA IQQS N D+ KFLDG+Y+
Sbjct: 121 RIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIYI 180
Query: 628 SEK 636
K
Sbjct: 181 IMK 183
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 134 bits (323), Expect = 2e-30
Identities = 72/175 (41%), Positives = 112/175 (64%)
Frame = +1
Query: 112 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 291
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 292 VRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMA 471
VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK R K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKIL 125
Query: 472 PXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
P VTV + E+ +EG E V +AA I+Q+T + D F DG+Y+ EK
Sbjct: 126 PGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 131 bits (316), Expect = 2e-29
Identities = 73/175 (41%), Positives = 110/175 (62%)
Frame = +1
Query: 112 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 291
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 292 VRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMA 471
RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK + K+
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKIL 125
Query: 472 PXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
P VTV + E+I+EG E V +AA I+Q+T + D F DG+Y+ EK
Sbjct: 126 PGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 123 bits (296), Expect = 4e-27
Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Frame = +1
Query: 76 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 249
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 250 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 429
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 430 NFLGEKYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKF 609
NFLGEK + R +M V ++KD ++IEG SL DVS SA I N D F
Sbjct: 133 NFLGEKNVKRFRMRGAAR-VRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVF 191
Query: 610 LDGLYVSEK 636
LDG++V+E+
Sbjct: 192 LDGIFVTER 200
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 119 bits (287), Expect = 5e-26
Identities = 63/120 (52%), Positives = 79/120 (65%), Gaps = 4/120 (3%)
Frame = +1
Query: 91 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 258
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 259 KWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 438
WFG K A +RTVCSH+ NMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 116 bits (279), Expect = 5e-25
Identities = 66/123 (53%), Positives = 80/123 (65%)
Frame = +1
Query: 277 KELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIT 456
KELA VRT+CSHV NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 457 RVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
+M V S QKDELI+EGN E VS+SAALIQ++T V N DI KF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 637 TTV 645
T+
Sbjct: 128 GTM 130
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 111 bits (268), Expect = 1e-23
Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Frame = +1
Query: 94 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 252
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 253 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 432
WFG++K LA + T+ V NMI GVT G++YKM VY+HFPI +E +
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNG 122
Query: 433 FLGEKYITRVKMAPXVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKF 609
F+G K V V + N KDE+ IEG +LEDVS I Q T + + D+ KF
Sbjct: 123 FMGHKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKF 182
Query: 610 LDGLYV 627
LDG+YV
Sbjct: 183 LDGIYV 188
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 111 bits (266), Expect = 2e-23
Identities = 65/175 (37%), Positives = 101/175 (57%)
Frame = +1
Query: 112 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 291
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 292 VRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMA 471
T+ +H NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK K+
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKII 121
Query: 472 PXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
VTV DE+ I G E V ++AA I+ +T + D F DG+Y++E+
Sbjct: 122 EGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 109 bits (262), Expect = 6e-23
Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 2/184 (1%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 264
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 265 FGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 444
+ +K A VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGL 120
Query: 445 KYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLY 624
K I + V V + K E+I+ +E + ++LIQ ++ N D F+DG+Y
Sbjct: 121 KRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIY 180
Query: 625 VSEK 636
++ K
Sbjct: 181 LASK 184
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 108 bits (260), Expect = 1e-22
Identities = 55/186 (29%), Positives = 112/186 (60%), Gaps = 1/186 (0%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 267
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 268 GSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 447
+++ A + ++ +H+ NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK
Sbjct: 63 ADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEK 120
Query: 448 YITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYV 627
I R K+ P V V + +++++EG+ + +V+ +AA I+ ST + D F DG+Y+
Sbjct: 121 NIRRAKILPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYI 177
Query: 628 SEKTTV 645
+K +
Sbjct: 178 YKKEVI 183
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 108 bits (260), Expect = 1e-22
Identities = 60/173 (34%), Positives = 102/173 (58%)
Frame = +1
Query: 118 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 297
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 298 TVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAPX 477
T SH+ N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK + ++A
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEK---KPRIAKI 122
Query: 478 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
+ +E+++ G + EDV +AA I+Q T + D F DG+Y+ +K
Sbjct: 123 LGETKVKVSGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 108 bits (259), Expect = 1e-22
Identities = 64/164 (39%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWF 267
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 268 GSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 447
+KK+ A V T+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGER 117
Query: 448 YITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQST 579
+ P V +KD++I+EG L+ V+ +AA I +T
Sbjct: 118 GKRIAGIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLAT 158
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 100 bits (239), Expect = 3e-20
Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 270
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFA 59
Query: 271 SKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK- 447
+++E + T SH+ NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKA 117
Query: 448 -YITRVKMAPXVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXN--NDIXKFLD 615
I + V V + K + E+++E E A++I+QST + D +F D
Sbjct: 118 PIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTD 177
Query: 616 GLYVSEK 636
G+++ K
Sbjct: 178 GIWLYYK 184
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 99.5 bits (237), Expect = 6e-20
Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Frame = +1
Query: 115 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 294
K+ +P+G+T V VTV L R F+H +++R + L +V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALA 68
Query: 295 RTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAP 474
T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Query: 475 --XVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
V + K ++ + G E V +AA I++S + N D F DG+Y+ K
Sbjct: 126 WSPAEVEVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 99.5 bits (237), Expect = 6e-20
Identities = 58/174 (33%), Positives = 100/174 (57%)
Frame = +1
Query: 115 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 294
+V+IP+G+TV ++ +GP G +NF+++ V I + + ++ ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAIL 70
Query: 295 RTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAP 474
T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ +
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMG 128
Query: 475 XVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
V+ PK +D +++ G D++ +AA I+ +T V N D FLDG+YV EK
Sbjct: 129 NTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 97.5 bits (232), Expect = 2e-19
Identities = 60/185 (32%), Positives = 102/185 (55%), Gaps = 5/185 (2%)
Frame = +1
Query: 97 QIVANQKVKIPDGLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRLLKVEK 261
++ + V++P+ + + ++ R T+K GP+G R K+ V I + + ++ +V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIEVGDGKV-RVYT 75
Query: 262 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 441
KK A V T H+ N+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+G
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIG 133
Query: 442 EKYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGL 621
EK+ R K+ V S + ++ + G +E+ +AA ++Q+T + D F DG+
Sbjct: 134 EKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGI 190
Query: 622 YVSEK 636
Y+ +K
Sbjct: 191 YIVKK 195
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 96.7 bits (230), Expect = 4e-19
Identities = 60/161 (37%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Frame = +1
Query: 157 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVXNMIKG 333
R++ VKG G ++F+ + V IR+ + LK E K++LA + T S V N+ +G
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEG 65
Query: 334 VTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAPXVTVVNSPKQKDE 513
V G+ K++ VYAHFPI + +G I+ + NF GE+ + K+ VV+ + ++
Sbjct: 66 VGVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGED 120
Query: 514 LIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
+I+ G+ L DVS +AA ++Q T V N D FLDG+YV EK
Sbjct: 121 VIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 92.7 bits (220), Expect = 7e-18
Identities = 54/174 (31%), Positives = 93/174 (53%)
Frame = +1
Query: 115 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 294
+++IP+ + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 295 RTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAP 474
T SH+ NM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK R +
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTIHG 121
Query: 475 XVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
V +EL + G +E V +AA I+Q T + + D+ F DG+Y++ K
Sbjct: 122 DTDV---EIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 91.9 bits (218), Expect = 1e-17
Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Frame = +1
Query: 100 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 264
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 265 FGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 444
++++ A + + +++ NM KGVT+G +YK++ VY+HFP + + I NF+GE
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGE 135
Query: 445 KYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLY 624
+ RV Q ++I+ G E V +AA ++Q+T + + D F DG+Y
Sbjct: 136 N-VPRVAEIVDPENTEVIVQGQDIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIY 194
Query: 625 VSEK 636
+ EK
Sbjct: 195 IVEK 198
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 91.5 bits (217), Expect = 2e-17
Identities = 55/174 (31%), Positives = 102/174 (58%), Gaps = 5/174 (2%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 255
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 256 EKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNF 435
E + K+E A + T + NM GVT+G++YK++ +Y HFP+ V +GN ++ I NF
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENF 117
Query: 436 LGEKYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNND 597
LG K + + V V K K++++IEG E VS+ AA +Q +T + ++
Sbjct: 118 LGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAATELHGDE 169
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 264
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 265 FGSKKELAAVRTVCSHVXNMIKGVTKG 345
+G++KELA V T+CS V N IK VT G
Sbjct: 61 WGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 84.2 bits (199), Expect = 2e-15
Identities = 51/173 (29%), Positives = 92/173 (53%)
Frame = +1
Query: 118 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 297
++IP + V + ++++ L++ F V + +V +K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 298 TVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAPX 477
T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ + A
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGER---SPRTAEI 123
Query: 478 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYVSEK 636
V + D L + G S +DV +AA I+++T + D F DG+Y+ K
Sbjct: 124 VGETQVSVKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLISK 176
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 72.9 bits (171), Expect = 6e-12
Identities = 48/171 (28%), Positives = 85/171 (49%)
Frame = +1
Query: 115 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 294
++K+PD + +++ + +KG G R F+ V + +K+ +K V
Sbjct: 9 EIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIV 67
Query: 295 RTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAP 474
T S +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK K+
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVD 125
Query: 475 XVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNNDIXKFLDGLYV 627
V + D + I G + +AA I+++T + + D F DG+++
Sbjct: 126 GCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 264
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 265 FGSKKELAAVRTVCSHVXNMIKGV 336
+ K LA T+ SHV NMIK V
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +1
Query: 343 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAPXVTVVNSPKQKDELI 519
GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V S QK+EL+
Sbjct: 33 GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAFYASQAQKNELM 91
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 57.2 bits (132), Expect = 3e-07
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = -3
Query: 648 HNSCFLRYIKTIQELXDIVIXDCSRLLDESSRARDIFQRVAFND*FILLFWRVNDSHXRC 469
+N R I TIQE DI++ D + LL+ SS R+ FQ V N+ FILL R
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 468 HLYPCDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 319
+ F TQE++ N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 56.8 bits (131), Expect = 4e-07
Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Frame = +1
Query: 91 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRLLKVEKW 264
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL ++
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL----RY 56
Query: 265 FGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 444
+++ VC N I G G++Y +R + F +G +++ ++NFL
Sbjct: 57 GMAQQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFLDR 115
Query: 445 KYITRVKMAPXVTVVNSPKQ 504
+ K A + ++P++
Sbjct: 116 SMLGDTKCAETLLRGSAPRK 135
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 52.8 bits (121), Expect = 7e-06
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 267
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 268 GSKKELAAVR-TVCSHVXNMIKGVTKGFQYKM 360
+K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 52.4 bits (120), Expect = 9e-06
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 279
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 280 ELAAVRTVCSHVXNMIKGVTKGFQYKMRAV 369
A T + V NM++GV++GF+ K++ V
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQGFERKLQLV 92
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 52.4 bits (120), Expect = 9e-06
Identities = 47/157 (29%), Positives = 75/157 (47%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
VA +KIP G+ V+V + +TVKG G L R H AV + + L + S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGS 62
Query: 283 LAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRV 462
A T + + NM++GV GFQ K+ V + EG ++ +G + +
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNI 116
Query: 463 KMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 573
+M +T V +P Q E+I++G + VS AA I++
Sbjct: 117 EMPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +1
Query: 118 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 297
+KIPD + + VK LV V+G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 298 TVCSHVXNMIKGVTKGF 348
S + NM+KGVT+GF
Sbjct: 67 LYRSLIFNMVKGVTEGF 83
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 51.2 bits (117), Expect = 2e-05
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 279
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 280 ELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITR 459
A T S + NM++GV+KGF+ + V + + GN ++ L Y
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYR---ASKSGNKLV-----LNVGYSHP 113
Query: 460 VKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 570
V++ P + + +++++G E V + AA I+
Sbjct: 114 VEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR 150
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/89 (33%), Positives = 49/89 (55%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 283 LAAVRTVCSHVXNMIKGVTKGFQYKMRAV 369
A T S + NM+ GV+KGF+ + +
Sbjct: 62 RALHGTTRSLINNMVIGVSKGFEKSLEII 90
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 49.6 bits (113), Expect = 6e-05
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Frame = +1
Query: 67 LVVKQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPR 243
+ +K M +I N V IP+ + V + ++ +KGP G L + + DI ++ N
Sbjct: 1 MFIKTFKTMSRI-GNIPVLIPNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHN 56
Query: 244 LLKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIE 423
+ V++ KK A + NMIKGV+ GF+ K+ + F N + N I+
Sbjct: 57 NIIVKRKHNDKKNRALHGLYRMLIYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILN 115
Query: 424 IRNFLGEKYITRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 570
+ +G + +K+ +T+ + ++I++ + + AA I+
Sbjct: 116 LN--IGYSHNIMIKLPQSITLEVKMDKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 48.4 bits (110), Expect = 1e-04
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Frame = +1
Query: 118 VKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 294
+ IP G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMH 66
Query: 295 RTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAP 474
T + + NM+KGVT+GF+ + V + +G + I N +G + ++ P
Sbjct: 67 GTTRAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEP 120
Query: 475 XVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 573
+ ++ + + +I+ G E V AA I++
Sbjct: 121 GIEII--VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 46.0 bits (104), Expect = 8e-04
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWF 267
+A + + +P G+TV +K +V VKGP+G L + F ++ +++ V P ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 268 GSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAV 369
+K T S + NM+ GVT+G++ ++ V
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTEGYKKELEIV 97
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ + IPD ++V + VTVKGP+G LKR V + V+ ++ K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQ 60
Query: 283 LAAVRTVC-SHVXNMIKGVTKGFQYKMRAV 369
+C + V NMI+GV+KG+ K+ V
Sbjct: 61 SRERHGLCRTLVANMIEGVSKGYSKKLEIV 90
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Frame = +1
Query: 157 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 309
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 310 HVXNMIKGVTKG 345
+ NMI+G+T G
Sbjct: 113 QIKNMIRGITSG 124
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 44.0 bits (99), Expect = 0.003
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Frame = +1
Query: 118 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 288
+ IP G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 289 AVRTVC-SHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVK 465
A + S V NM+ GV++G++ ++ V + + +GN IIE+ LG + ++
Sbjct: 68 AFHGLYRSLVHNMVVGVSEGYKKELELVGVGYR---ASNQGN-IIELA--LGYTHNIFIQ 121
Query: 466 MAPXVTV-VNSPKQKDELII 522
+ V V S + K+ LII
Sbjct: 122 LPAEVKVETKSERNKNPLII 141
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 279
V N+ +++P+ + V +K R ++V+GP+G L+ F H + + N + K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEI 60
Query: 280 ELAAVR-TVCSHVXNMIKGVTKGFQYKMRAV 369
+ + T + + NM++GV+KGFQ ++ V
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSKGFQKTLKIV 91
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 42.7 bits (96), Expect = 0.007
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKK 279
V + IP+G+ V + V + GP+G L + FK ++A+ ++ L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 280 ELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN-FLGEKYIT 456
A T S + NMI GV +GF+ K+ IN V + N L + + T
Sbjct: 61 ARAMWGTARSIICNMITGVKEGFKLKLE-------INGVGYRAMVKGKYLNLMLAKSHNT 113
Query: 457 RVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALI 567
++++ P ++ PKQ + +++EG E + A++I
Sbjct: 114 KIEI-PSNIKIDLPKQ-NIILLEGIDKEKLGQFASII 148
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 41.9 bits (94), Expect = 0.013
Identities = 32/157 (20%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ + + +P + + + + + VKGP+G L R+ L + ++ N ++L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 283 LAAVRTVC-SHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITR 459
+ +C + V NM+ GV+KGF+ ++ V + +G+ + + N +G +
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLELVGVGYR---AAIQGSKL--VLN-VGYSHPVE 114
Query: 460 VKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 570
+ P + + + + + +++ G E V ++AA I+
Sbjct: 115 IPFPPGIQI--AVEGNNIIVVSGTDKELVGNTAARIR 149
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 41.5 bits (93), Expect = 0.017
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ + IPD + V + VTVKGP+G LKR V + V+ ++ +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRS 60
Query: 283 LAAVRTVC-SHVXNMIKGVTKGFQYKMRAV 369
+C + V NM+ GV++G+ K+ V
Sbjct: 61 SRERHGLCRTLVANMVIGVSQGYSKKLEIV 90
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 41.1 bits (92), Expect = 0.022
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ N+ + +P G+ + +VTVKGP+G L R F ++IR V + + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 283 LAAVRTVCSHVXNMIKGVTKGF--QYKMRAV 369
T + + NM+ GV++GF + +MR V
Sbjct: 62 KTIHGTTRALLNNMVVGVSEGFKKELEMRGV 92
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 40.3 bits (90), Expect = 0.039
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 283 LAAVRTVCSHVXNMIKGVTKGF 348
A + V N +KGV+ G+
Sbjct: 62 RALHGLTRTLVANAVKGVSDGY 83
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 39.9 bits (89), Expect = 0.052
Identities = 26/89 (29%), Positives = 42/89 (47%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ + V IP G+ V + + VTVKGP+G L V+++ LL + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 283 LAAVRTVCSHVXNMIKGVTKGFQYKMRAV 369
+ V NM+ GVT GF+ + V
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELV 90
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 39.5 bits (88), Expect = 0.068
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 279
V + + +P + +++K+ LV +KG GVL N L A+++ + ++ + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANE---EKH 60
Query: 280 ELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITR 459
T S + NMI GV+KGF+ ++ + + S IEI G ++
Sbjct: 61 TKQLHGTTNSIIENMIIGVSKGFKKELEIK----GVGYKSALKGSQIEIA--AGYSHLVY 114
Query: 460 VKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTT 582
V + P V PK ++II G + V AA+I++ T
Sbjct: 115 VNV-PKELKVEIPK-PTQIIISGIDNQKVGELAAVIRKVRT 153
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 39.5 bits (88), Expect = 0.068
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ +K+P G+ V + VTVKGP+G L R+F+ V I L+ G+ K
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKA 60
Query: 283 LAAVRTVC-SHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITR 459
+ + + + NMI GV GF + V + +G+ ++ F
Sbjct: 61 TRSFFGLSRTLLDNMIVGVKDGFDKNLEIVGVGMRAD---KDGDKVVFKVGFSHS----- 112
Query: 460 VKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 570
V +AP + S ++ + G + EDV AA I+
Sbjct: 113 VTVAPPAGITLSVDGTTKVKVSGINKEDVGQMAAEIR 149
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 39.1 bits (87), Expect = 0.090
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +1
Query: 91 MKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWF 267
M+QI + + IP+ + + ++ + V G G L F H + ++ N + L V +
Sbjct: 1 MEQISGYKSIICIPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRY 59
Query: 268 GSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAV 369
+ A + T CS + +MI GVT+GF K++ +
Sbjct: 60 RNHVNRALLGTTCSLINSMIVGVTEGFVKKLQLI 93
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 39.1 bits (87), Expect = 0.090
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
V + ++IP G V + VKG G L R F V+I+ N + + VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQ-ISVERLNELKPT 61
Query: 283 LAAVRTVCSHVXNMIKGVTKGFQYKMR 363
T + + NM+KGV++GF+ +++
Sbjct: 62 KQLHGTTNALIANMVKGVSEGFKKELK 88
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 39.1 bits (87), Expect = 0.090
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ +++ D V VK ++ V GP+G L + I V + V++ SK+
Sbjct: 4 IGKMPIRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRA 61
Query: 283 LAAVRTVCSHVXNMIKGVTKGFQYKM 360
A V NM++GVTKGF K+
Sbjct: 62 RAMHGLYRMLVSNMVEGVTKGFTRKL 87
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 38.7 bits (86), Expect = 0.12
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ + + IP +T ++ + + VKGP+G L R + + + L+K ++
Sbjct: 4 IGKRPIPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQ 63
Query: 283 LAAV-RTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITR 459
L + RT+ V NM+ GV+KGF+ ++ + +G ++I L Y
Sbjct: 64 LHGLSRTL---VANMVDGVSKGFEKRLEIQGVGYR---AQVQGKNLI-----LNVGYSKP 112
Query: 460 VKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 570
V+M P + + + +II G E V + AA I+
Sbjct: 113 VEMNPPQGITVAVENNTNVIISGIDKEVVGNIAAQIR 149
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 38.3 bits (85), Expect = 0.16
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-----LAVDIRMVNPRLLKVEKWF 267
+ N+ V IP G+TV + R + V+GP+G K +FKH +AVD N ++ +
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKHRPEVKVAVD-SDTNQVIVSRDGDD 60
Query: 268 GSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAV 369
+E + V NM+ GV G++ K+ V
Sbjct: 61 RPSREFHGLTRAI--VANMLVGVKDGYEKKLEIV 92
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/86 (24%), Positives = 43/86 (50%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ Q + +P +T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 46 IGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRA 104
Query: 283 LAAVRTVCSHVXNMIKGVTKGFQYKM 360
+ NM+ GV+KGF+ K+
Sbjct: 105 NQMHGLFRTLTDNMVVGVSKGFEKKL 130
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 37.5 bits (83), Expect = 0.28
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 151 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVXNMI 327
K VTV+GP+G L+ N H + + + R +K+++ A T+ + + NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 328 KGVTKGF 348
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 37.1 bits (82), Expect = 0.36
Identities = 33/157 (21%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKK 279
VA + IP+ + + + +V VKG +G L +++D V +++ ++ +++
Sbjct: 4 VAKNPITIPENVDLSINENVVIVKGSKGELDFVLPDTISLD---VADKVITIKYDEENQQ 60
Query: 280 ELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITR 459
+A T S + NM+ GV++GF+ K+ + + ++E+ LG + +
Sbjct: 61 SVALAGTSRSLINNMVIGVSEGFEKKLELIGVGYRAKA----SGKLLELT--LGFSHPVK 114
Query: 460 VKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 570
++ P V +P Q E++++ ++ + + +AA I+
Sbjct: 115 YQL-PDEVEVETPSQ-TEVVLKSHNKQILGQAAAEIR 149
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 37.1 bits (82), Expect = 0.36
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ + + +P +T+ + + VTVKGP+G L R F ++ +V V K +
Sbjct: 4 IGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRP 60
Query: 283 LAAVRTVC-SHVXNMIKGVTKGFQYKM 360
+C + + NM++GV++GF K+
Sbjct: 61 AKERHGLCRTLLANMVEGVSQGFTKKL 87
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 37.1 bits (82), Expect = 0.36
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGS 273
+A + + P+ + V+ K + V+GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 274 KKELAAVRTVCSHVXNMIKGVTKGF 348
A T+ + V NMIKGVT+GF
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTEGF 87
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 36.7 bits (81), Expect = 0.48
Identities = 38/151 (25%), Positives = 69/151 (45%)
Frame = +1
Query: 118 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 297
+++PD +TV + +TVKGP+G L R F + N + + S+ + A
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYFDPKITFEQ--NDGEINFSR--SSESDKALHG 64
Query: 298 TVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKMAPX 477
T +++ +MI+GV G++ ++ + + +GN I + +T AP
Sbjct: 65 TERANLASMIEGVLNGYKKTLKLIGVGYR---AQAQGNKITLNVGYSHPVVLT----APE 117
Query: 478 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 570
V + D + +EG S +DV AA I+
Sbjct: 118 GVSVKATSATD-VEVEGVSKQDVGQFAAEIR 147
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 36.3 bits (80), Expect = 0.64
Identities = 30/141 (21%), Positives = 60/141 (42%)
Frame = +1
Query: 109 NQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 288
++K++IP + + +K + ++GP G + N H N LL +K+ +
Sbjct: 30 HEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRKKKS 89
Query: 289 AVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYITRVKM 468
+ S + IKG+ +GF K+ E N I++ LG + +++
Sbjct: 90 FLNLYKSLIKLKIKGILQGF--KLNLFLKGLGFKAFIEEKNLILK----LGYSHSITIEI 143
Query: 469 APXVTVVNSPKQKDELIIEGN 531
+ ++N Q ++LI N
Sbjct: 144 PENIKIIN---QTNKLIFSSN 161
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 35.9 bits (79), Expect = 0.84
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+ + + +P L+ + +TV GP+G L R +++ ++N + K G K
Sbjct: 4 IGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILNDTI--AVKTSGQTKM 60
Query: 283 LAAVRTVC-SHVXNMIKGVTKGFQYKMR 363
+ + + + + NMI+GV+ GF K++
Sbjct: 61 ASQLHGLSRTLISNMIEGVSNGFFKKLQ 88
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 195
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 34.3 bits (75), Expect = 2.6
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 282
+A + + G+ V V + +T+KG +G L R AV +++ + ++ G K
Sbjct: 4 IAKAPITVLAGVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDA 61
Query: 283 LAAVRTVCSHVXNMIKGVTKGFQ 351
A T ++V NM+ GVT GF+
Sbjct: 62 WAQAGTARANVNNMMIGVTTGFK 84
>UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19;
Bacteria|Rep: 50S ribosomal protein L6 - Gloeobacter
violaceus
Length = 191
Score = 34.3 bits (75), Expect = 2.6
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 118 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG--SKKELAA 291
+ IP + V + R V VKGP+G L +V++ + RLL + ++++
Sbjct: 9 IAIPPKVEVTLDGRRVVVKGPKGTLDLTLPD-SVEVVREDGRLLVTRRGESRRAREQHGL 67
Query: 292 VRTVCSHVXNMIKGVTKGFQYKMR 363
RT+ V NM+ GVT GF M+
Sbjct: 68 GRTL---VANMVTGVTTGFTKPMQ 88
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 329 LIMFXTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 156
L +F C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 155 DFT 147
F+
Sbjct: 82 CFS 84
>UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n=2;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L6 -
Emiliania huxleyi
Length = 181
Score = 33.9 bits (74), Expect = 3.4
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR---NFKHLAVDIRMVNPRLLKVEKWFGS 273
+ Q + IPD + + ++ + V V GP+G L R +F +D L K E+ S
Sbjct: 4 IGKQYISIPDKVNIRLEGQKVFVDGPKGKLTRILPSFICCTIDEPEKKVFLEKAEENKLS 63
Query: 274 KKELAAVRTVCSHVXNMIKGVTKGFQYKM 360
+ RT+ S NM+ GV+ G+ K+
Sbjct: 64 QALYGLSRTLLS---NMVTGVSSGWHKKL 89
>UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L6 - Lentisphaera araneosa HTCC2155
Length = 181
Score = 33.5 bits (73), Expect = 4.5
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK---HLAVDIRMVNPRLLKVEKWFGS 273
+ N+ + I G+ V + + V+VKGP+G LK +VD + + + S
Sbjct: 4 IGNKAISITAGVEVKISGKEVSVKGPKGELKHTLTPRVEASVDADSNEVVVTRQDDSRFS 63
Query: 274 KKELAAVRTVCSHVXNMIKGVTKGFQYKM 360
K E R++ + NMI GV+ G++ ++
Sbjct: 64 KAEHGLNRSL---ISNMIVGVSTGWKKEL 89
>UniRef50_A3ICC8 Cluster: Dipicolinate synthase; n=1; Bacillus sp.
B14905|Rep: Dipicolinate synthase - Bacillus sp. B14905
Length = 259
Score = 33.5 bits (73), Expect = 4.5
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = -1
Query: 569 WMRAAELETSSKELPSMISSSF--CFGELTTVTXGAIFTLVMYFSPKKLRISIIELPSVV 396
W+ E ++ KEL +M+ S F + TTV + LV+ F P K+ + I+ L V
Sbjct: 6 WLVIGE-DSRLKELATMLRSPSRTVFYKRTTVWNEELNKLVLEFQPNKIILPILPLKIEV 64
Query: 395 TQLMG---K*AYTARI-LYWKPLV 336
QL G YT R+ ++WK L+
Sbjct: 65 EQLYGISQVKFYTGRLTMHWKHLL 88
>UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Lactobacillus
johnsonii
Length = 176
Score = 33.5 bits (73), Expect = 4.5
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 118 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAV 294
+++P+ +TV +TVKGP+G L R F D R+ + ++ S+ + A
Sbjct: 9 IEVPEKVTVTKNGDDITVKGPKGELTRYF-----DPRITFEQKDGEIHFSRSSEADKALH 63
Query: 295 RTVCSHVXNMIKGVTKGFQYKMRAV 369
T +++ +MI+GVT G+ K+ V
Sbjct: 64 GTERANLASMIEGVTDGYVKKLTLV 88
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 33.1 bits (72), Expect = 5.9
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +1
Query: 199 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAH 378
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 379 FPINCVTTEGNSIIE 423
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_Q5PA73 Cluster: 50S ribosomal protein L6; n=6;
Anaplasmataceae|Rep: 50S ribosomal protein L6 -
Anaplasma marginale (strain St. Maries)
Length = 181
Score = 33.1 bits (72), Expect = 5.9
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHV-KSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKWFGS 273
V +++P+G+ V V VTV G G +F L IR V LL V + S
Sbjct: 4 VGAMPIEVPEGVKVDVCDGNSVTVIGKDGT-SSSFS-LCHGIRAVLDGSTLLLVNERQSS 61
Query: 274 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 453
+ + S + N IKG++KGF ++ + + C GN + + F+G +
Sbjct: 62 PRAKVMWGSYRSGISNAIKGLSKGFSVELEVNGVGYRVVC----GNKYLSM--FVGFSHG 115
Query: 454 TRVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAA 561
R + P + PK +L+I+G+ V AA
Sbjct: 116 VRY-VIPEGIEIKCPK-PTQLVIKGSDKVKVHMVAA 149
>UniRef50_Q2S3P9 Cluster: 50S ribosomal protein L6; n=1;
Salinibacter ruber DSM 13855|Rep: 50S ribosomal protein
L6 - Salinibacter ruber (strain DSM 13855)
Length = 184
Score = 33.1 bits (72), Expect = 5.9
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Frame = +1
Query: 103 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSK 276
+ + + D +TV V +VT++GP+G L + +DI + + V + K
Sbjct: 4 IGDNPIPFGDEVTVSVDDHNVVTIEGPKGTLTEQIDPEMTLDIADDH---VVVRRPTNQK 60
Query: 277 KELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIT 456
+ + S + NM++GVT+G++ +++ + + + +EI
Sbjct: 61 RHRSLHGLSRSLIVNMVEGVTEGYKKELKIIGVGYRAQM----SDETLEIALGYSHPIYF 116
Query: 457 RVKMAPXVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 570
V+V + Q D +I+EG E V AA I+
Sbjct: 117 LPPSDVAVSVDSDRGQDDIIIVEGIDKELVGQVAAKIR 154
>UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6;
Mycoplasmataceae|Rep: 50S ribosomal protein L6 -
Mycoplasma genitalium
Length = 184
Score = 32.7 bits (71), Expect = 7.8
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 103 VANQKVKI-PDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLKVEKWFGSK 276
+ N+ +KI P +++ + L+T+KGP G K+L + + N + KV K
Sbjct: 4 IGNRSIKIDPSKVSLMQTTTLLTIKGPLGENTIKLPKNLPLKFVVENDTI-KVTNNNNLK 62
Query: 277 KELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPIN 390
+ T + V N + GVTKGF+ K+ V + N
Sbjct: 63 QTKILHGTFNALVNNAVIGVTKGFEKKLILVGVGYRAN 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,594,025
Number of Sequences: 1657284
Number of extensions: 12977538
Number of successful extensions: 31385
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 30343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31320
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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