Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_H02
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   1.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   1.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   1.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   1.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   1.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   1.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   1.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.3  

>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 316 ITFXPFGPIVTATASARMSTPCSMRALTSA 227
           ++  P G   T+TAS  +S+P S  + TS+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 316 ITFXPFGPIVTATASARMSTPCSMRALTSA 227
           ++  P G   T+TAS  +S+P S  + TS+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 316 ITFXPFGPIVTATASARMSTPCSMRALTSA 227
           ++  P G   T+TAS  +S+P S  + TS+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 316 ITFXPFGPIVTATASARMSTPCSMRALTSA 227
           ++  P G   T+TAS  +S+P S  + TS+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 316 ITFXPFGPIVTATASARMSTPCSMRALTSA 227
           ++  P G   T+TAS  +S+P S  + TS+
Sbjct: 105 VSTSPPGKPATSTASQNLSSPASSTSSTSS 134


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 316 ITFXPFGPIVTATASARMSTPCSMRALTSA 227
           ++  P G   T+TAS  +S+P S  + TS+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 316 ITFXPFGPIVTATASARMSTPCSMRALTSA 227
           ++  P G   T+TAS  +S+P S  + TS+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSS 178


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
 Frame = -2

Query: 76  PYFSKILAGF--VKRDLPP 26
           PYF K+L GF  +++ LPP
Sbjct: 109 PYFWKMLTGFGKIEQVLPP 127


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -3

Query: 180 YGEKQFDEQQRGRRNIFKNCFDISSISIKVQTAA 79
           Y +++   + +  RN+FKN +    +SI V +++
Sbjct: 114 YIDEKLKTRDQKERNLFKNAYFQLVLSISVYSSS 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,215
Number of Sequences: 336
Number of extensions: 2146
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)