BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_H02
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 186 7e-48
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 181 3e-46
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 57 1e-08
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 57 1e-08
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 56 2e-08
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 55 4e-08
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 52 4e-07
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 52 4e-07
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 49 2e-06
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 49 2e-06
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 42 4e-04
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 42 4e-04
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 36 0.015
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 5.4
Z83102-10|CAB05469.2| 420|Caenorhabditis elegans Hypothetical p... 27 9.5
AL032664-1|CAA21769.2| 420|Caenorhabditis elegans Hypothetical ... 27 9.5
AC024805-7|AAK39344.3| 248|Caenorhabditis elegans Hypothetical ... 27 9.5
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 186 bits (454), Expect = 7e-48
Identities = 89/125 (71%), Positives = 104/125 (83%)
Frame = +3
Query: 198 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKG 377
R YAKDV+FGA+ R ML GV++LADAV+VTMGPKG NVI+EQSWGSPKITKDGVTVAK
Sbjct: 15 RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKS 74
Query: 378 VELKDKFQNIGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXG 557
++LKDK+QN+GA L+Q+V N N EAGDGTT ATVLARAIA EGFE I +G N ++I G
Sbjct: 75 IDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRG 134
Query: 558 VMLAV 572
VM AV
Sbjct: 135 VMNAV 139
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 181 bits (441), Expect = 3e-46
Identities = 87/125 (69%), Positives = 102/125 (81%)
Frame = +3
Query: 198 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKG 377
R YAKDV+FGA+ R ML GV++LADAV+VTMGPKG NVI+EQSWGSPKITKDGVTVAK
Sbjct: 15 RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKS 74
Query: 378 VELKDKFQNIGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXG 557
++LKDK+QN+GA L+Q+V N N EAGDGTT ATVL RAIA EGFE+ S N ++I G
Sbjct: 75 IDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRGNAVEIRRG 134
Query: 558 VMLAV 572
VM AV
Sbjct: 135 VMNAV 139
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Frame = +3
Query: 189 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGXNVIL----EQSWGSPKITKD 356
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 357 GVTVAKGVELKDKFQNIGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGAN 536
G T+ K + + N A ++ ++ + E GDGTT+ TVLA + E + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 537 PIDITXGVMLAV 572
P I G A+
Sbjct: 120 PQTIISGYRRAL 131
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Frame = +3
Query: 189 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGXNVIL----EQSWGSPKITKD 356
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 357 GVTVAKGVELKDKFQNIGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGAN 536
G T+ K + + N A ++ ++ + E GDGTT+ TVLA + E + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 537 PIDITXGVMLAV 572
P I G A+
Sbjct: 120 PQTIISGYRRAL 131
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Frame = +3
Query: 189 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGXNVIL----EQSWGSPKITKD 356
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 357 GVTVAKGVELKDKFQNIGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGAN 536
G T+ K + + N A ++ ++ + E GDGTT+ TVLA + E + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 537 PIDITXGVMLAV 572
P I G A+
Sbjct: 120 PQTIISGYRRAL 131
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/101 (32%), Positives = 55/101 (54%)
Frame = +3
Query: 267 LADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAXLVQNVXNNTN 446
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ A L+ + + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 447 XEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXGVMLA 569
E GDGTT VLA A+ E + I +G +PI I G LA
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLA 141
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/101 (32%), Positives = 55/101 (54%)
Frame = +3
Query: 267 LADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAXLVQNVXNNTN 446
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ A L+ + + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 447 XEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXGVMLA 569
E GDGTT VLA A+ E + I +G +PI I G LA
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLA 141
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/101 (32%), Positives = 55/101 (54%)
Frame = +3
Query: 267 LADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAXLVQNVXNNTN 446
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ A L+ + + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 447 XEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXGVMLA 569
E GDGTT VLA A+ E + I +G +PI I G LA
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLA 141
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 54.8 bits (126), Expect = 4e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = +3
Query: 210 KDVRFGADVRALMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELK 389
KD VR + +ADAV ++GP+G + +++ G IT DG T+ + +
Sbjct: 24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83
Query: 390 DKFQNIGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANPIDIT 551
A ++ + + EAGDGTTT V+A A+ +SKG +P I+
Sbjct: 84 HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTIS 133
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 54.8 bits (126), Expect = 4e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = +3
Query: 210 KDVRFGADVRALMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELK 389
KD VR + +ADAV ++GP+G + +++ G IT DG T+ + +
Sbjct: 24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83
Query: 390 DKFQNIGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANPIDIT 551
A ++ + + EAGDGTTT V+A A+ +SKG +P I+
Sbjct: 84 HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTIS 133
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/97 (27%), Positives = 51/97 (52%)
Frame = +3
Query: 249 LQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAXLVQN 428
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+ K +++ A + +
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81
Query: 429 VXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANP 539
+ + + E GDGTT+ VLA I + I G +P
Sbjct: 82 IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHP 118
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/97 (27%), Positives = 51/97 (52%)
Frame = +3
Query: 249 LQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAXLVQN 428
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+ K +++ A + +
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81
Query: 429 VXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANP 539
+ + + E GDGTT+ VLA I + I G +P
Sbjct: 82 IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHP 118
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/115 (26%), Positives = 55/115 (47%)
Frame = +3
Query: 225 GADVRALMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 404
G +R+ + +A+ V ++GP G + +L G +T DG T+ K +E++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVE---HP 74
Query: 405 IGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXGVMLA 569
G LV+ + + E GDGTT+ ++A + E + + +P I G LA
Sbjct: 75 AGKVLVE-LAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/115 (26%), Positives = 55/115 (47%)
Frame = +3
Query: 225 GADVRALMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 404
G +R+ + +A+ V ++GP G + +L G +T DG T+ K +E++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVE---HP 74
Query: 405 IGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXGVMLA 569
G LV+ + + E GDGTT+ ++A + E + + +P I G LA
Sbjct: 75 AGKVLVE-LAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/105 (25%), Positives = 47/105 (44%)
Frame = +3
Query: 243 LMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAXLV 422
L + G L D + +GPKG +L G K+TKDG + + + Q+ A ++
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77
Query: 423 QNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXG 557
+ GDGTT+ +L + + + +G +P +T G
Sbjct: 78 AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEG 122
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/105 (25%), Positives = 47/105 (44%)
Frame = +3
Query: 243 LMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAXLV 422
L + G L D + +GPKG +L G K+TKDG + + + Q+ A ++
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77
Query: 423 QNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANPIDITXG 557
+ GDGTT+ +L + + + +G +P +T G
Sbjct: 78 AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEG 122
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/105 (20%), Positives = 45/105 (42%)
Frame = +3
Query: 225 GADVRALMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 404
G V+ + +AD + ++GP+ +L G +T DG + + + +K +
Sbjct: 21 GHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVK----H 76
Query: 405 IGAXLVQNVXNNTNXEAGDGTTTATVLARAIAXEGFEKISKGANP 539
A + + + E GDGTT+ +LA + + + +P
Sbjct: 77 PAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHP 121
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 391 SLSSTPLATVTPSFVIFGDPQDCSRITFXPFGPIVTATASARMST 257
S + P TVTP V + D + P PIVT T +A ST
Sbjct: 610 SSPTVPTTTVTPEVVREDEDYDYTNEFAIPNEPIVTTTTTAIAST 654
>Z83102-10|CAB05469.2| 420|Caenorhabditis elegans Hypothetical
protein C54C8.11 protein.
Length = 420
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 115 Y*QYFN*GPNCCKPYFSKILAGFVKRDLPPVVGYEILV 2
Y QY N P CK Y+ ++ F DLP ++ LV
Sbjct: 337 YQQYVNRAPVKCKGYYYRLSCVFGVYDLPNLINRHELV 374
>AL032664-1|CAA21769.2| 420|Caenorhabditis elegans Hypothetical
protein C54C8.11 protein.
Length = 420
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 115 Y*QYFN*GPNCCKPYFSKILAGFVKRDLPPVVGYEILV 2
Y QY N P CK Y+ ++ F DLP ++ LV
Sbjct: 337 YQQYVNRAPVKCKGYYYRLSCVFGVYDLPNLINRHELV 374
>AC024805-7|AAK39344.3| 248|Caenorhabditis elegans Hypothetical
protein Y51H7C.5 protein.
Length = 248
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 231 DVRALMLQGVDILADAVAVTMGPKGXNVILEQSWGSPKITKDG 359
++ L L G D+L D +T G + + +E W S + +G
Sbjct: 161 NITNLTLHGKDVLTDPTLLTKGLRWTTLGVEYDWNSKEYPPNG 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,249,293
Number of Sequences: 27780
Number of extensions: 202865
Number of successful extensions: 628
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -