Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_H02
         (572 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              24   1.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   3.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   6.6  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 210 WHKILKVDMIYGE-KQFDEQQRGRRNIFKNCFDISSISIK 94
           W+ IL++ ++YGE    DE +       K C   +  +I+
Sbjct: 13  WYLILQIALVYGEISDIDEFREMTSKYRKKCIGETKTTIE 52


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 379 TPLATVTPSFVIFGDPQ 329
           +P A + P  V++G+PQ
Sbjct: 98  SPSAALQPQHVVYGNPQ 114


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +1

Query: 175 SINHINFQDFMP 210
           S++H++F +F+P
Sbjct: 310 SVDHVDFDEFLP 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,979
Number of Sequences: 438
Number of extensions: 2440
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)