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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G24
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0374 + 28381456-28381785,28382302-28382555,28382665-283827...    36   0.021
06_01_0752 + 5632809-5633690,5635372-5635509,5635711-5636016           33   0.15 
06_03_0054 - 16038103-16038251,16038256-16038619                       29   2.4  
09_02_0595 - 11051728-11051955,11052032-11052127,11052134-11052739     29   3.2  
12_02_0653 + 21545862-21546584,21546661-21546696,21547182-215474...    29   4.2  
01_01_0050 - 382451-382864,382950-383020,383131-383176,383302-38...    29   4.2  
11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016...    28   5.6  
12_01_0857 - 8043765-8043839,8044215-8044497,8044578-8044748,804...    28   7.4  

>02_05_0374 +
           28381456-28381785,28382302-28382555,28382665-28382773,
           28383272-28383410,28383525-28383582,28384179-28384196,
           28384301-28384423,28384483-28384681,28384763-28384796,
           28385044-28385153
          Length = 457

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = +3

Query: 441 HLDVQPALKSDGWETEPFELV---ERNEKLYGRGSTDDKGPV 557
           H+DV PA   D W+ +PF L    E  +KL GRG+TD  G V
Sbjct: 99  HMDVVPA-NPDEWDFDPFSLTFDSEDKDKLRGRGTTDCLGHV 139


>06_01_0752 + 5632809-5633690,5635372-5635509,5635711-5636016
          Length = 441

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +3

Query: 402 GNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVE--RNEKLYGRGSTDDKGPVLGWLHT 575
           G DP   ++ +  HLD  PA + + W   PF         ++Y RG+ DDK   + +L  
Sbjct: 97  GTDPSLPSLLLNSHLDSVPA-EPEQWLHPPFAAHRDAATGRVYARGAQDDKCLPIQYLEA 155

Query: 576 INAYKGTG 599
           I   +  G
Sbjct: 156 IRGLRDAG 163


>06_03_0054 - 16038103-16038251,16038256-16038619
          Length = 170

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 204 KQLLKEAVAIPSVSCDVKYRADCIRMV-HWMQDKLKEVGATTELRDVGFQTID 359
           K +L     +P+    VK   +C   + HW+Q+K K+ G  T    +G Q  D
Sbjct: 11  KDILDNKRPLPTTKV-VKLTEECSNAILHWLQEKKKDPGCPTITCSIGRQHFD 62


>09_02_0595 - 11051728-11051955,11052032-11052127,11052134-11052739
          Length = 309

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 294 QDKL-KEVGATTELRDVGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQP-ALK 467
           Q+K+ KEV   TE+ DVG+ T   K V+         G   ++N   +  H+D+ P   K
Sbjct: 17  QNKIPKEVYTITEMDDVGYPTAPTKAVKKFPTICGVLG---RRNFTILKDHIDLVPQEEK 73

Query: 468 SDGW 479
            + W
Sbjct: 74  EEAW 77


>12_02_0653 +
           21545862-21546584,21546661-21546696,21547182-21547401,
           21547590-21548025,21548103-21548273,21548354-21548636,
           21548716-21548829,21549012-21549082,21549417-21549429
          Length = 688

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 294 QDKL-KEVGATTELRDVGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQP-ALK 467
           Q+K+ KEV   TE+ DVG+ T   K V+         G   ++N   +  H+D+ P   K
Sbjct: 24  QNKIPKEVYTITEVDDVGYPTAPTKAVKKFPTICGVLG---RRNFTILKDHIDLVPQEEK 80

Query: 468 SDGW 479
            + W
Sbjct: 81  EEAW 84


>01_01_0050 -
           382451-382864,382950-383020,383131-383176,383302-383333,
           383409-383558,383666-383849,383934-384109,384580-384628,
           384724-384923,385515-385548
          Length = 451

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = +3

Query: 408 DPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEKLYGRGSTDDKGPVLGWLHT---I 578
           DP+ N+  +      Q  + +     +P+E V+  + +          P L W  T   +
Sbjct: 79  DPQPNSTDVAAVASQQAGIANQSAGVQPYETVQAPQAINTGPIVPHAQPQLSWSRTLIGV 138

Query: 579 NAYKGTGAELPVNLKFIF 632
             + G GA   V LK +F
Sbjct: 139 GVFLGVGASAAVILKKLF 156


>11_06_0093 +
           19999503-20000231,20000308-20000742,20000829-20001670,
           20001748-20001916
          Length = 724

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 294 QDKL-KEVGATTELRDVGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQP-ALK 467
           Q+K+ KEV   TE+ DVG+ T   K V+         G   ++N   +  H+D+ P   K
Sbjct: 24  QNKIPKEVYTITEVDDVGYPTAPTKVVKKFPTICGVLG---RRNFTILKDHIDLVPQEEK 80

Query: 468 SDGW 479
            + W
Sbjct: 81  EEAW 84


>12_01_0857 -
           8043765-8043839,8044215-8044497,8044578-8044748,
           8044826-8045670,8045828-8046262,8046339-8046563,
           8046700-8046781,8046814-8047067
          Length = 789

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 306 KEVGATTELRDVGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQP-ALKSDGW 479
           KEV   TE+ DVG+ T   K V+         G   ++N   +  H+D+ P   K + W
Sbjct: 29  KEVYTITEVDDVGYPTAPTKAVKKFPTICGVLG---RRNFTILKDHIDLVPQEEKEEAW 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,364,172
Number of Sequences: 37544
Number of extensions: 344661
Number of successful extensions: 740
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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