BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_G24 (650 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0374 + 28381456-28381785,28382302-28382555,28382665-283827... 36 0.021 06_01_0752 + 5632809-5633690,5635372-5635509,5635711-5636016 33 0.15 06_03_0054 - 16038103-16038251,16038256-16038619 29 2.4 09_02_0595 - 11051728-11051955,11052032-11052127,11052134-11052739 29 3.2 12_02_0653 + 21545862-21546584,21546661-21546696,21547182-215474... 29 4.2 01_01_0050 - 382451-382864,382950-383020,383131-383176,383302-38... 29 4.2 11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016... 28 5.6 12_01_0857 - 8043765-8043839,8044215-8044497,8044578-8044748,804... 28 7.4 >02_05_0374 + 28381456-28381785,28382302-28382555,28382665-28382773, 28383272-28383410,28383525-28383582,28384179-28384196, 28384301-28384423,28384483-28384681,28384763-28384796, 28385044-28385153 Length = 457 Score = 36.3 bits (80), Expect = 0.021 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%) Frame = +3 Query: 441 HLDVQPALKSDGWETEPFELV---ERNEKLYGRGSTDDKGPV 557 H+DV PA D W+ +PF L E +KL GRG+TD G V Sbjct: 99 HMDVVPA-NPDEWDFDPFSLTFDSEDKDKLRGRGTTDCLGHV 139 >06_01_0752 + 5632809-5633690,5635372-5635509,5635711-5636016 Length = 441 Score = 33.5 bits (73), Expect = 0.15 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = +3 Query: 402 GNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVE--RNEKLYGRGSTDDKGPVLGWLHT 575 G DP ++ + HLD PA + + W PF ++Y RG+ DDK + +L Sbjct: 97 GTDPSLPSLLLNSHLDSVPA-EPEQWLHPPFAAHRDAATGRVYARGAQDDKCLPIQYLEA 155 Query: 576 INAYKGTG 599 I + G Sbjct: 156 IRGLRDAG 163 >06_03_0054 - 16038103-16038251,16038256-16038619 Length = 170 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 204 KQLLKEAVAIPSVSCDVKYRADCIRMV-HWMQDKLKEVGATTELRDVGFQTID 359 K +L +P+ VK +C + HW+Q+K K+ G T +G Q D Sbjct: 11 KDILDNKRPLPTTKV-VKLTEECSNAILHWLQEKKKDPGCPTITCSIGRQHFD 62 >09_02_0595 - 11051728-11051955,11052032-11052127,11052134-11052739 Length = 309 Score = 29.1 bits (62), Expect = 3.2 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Frame = +3 Query: 294 QDKL-KEVGATTELRDVGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQP-ALK 467 Q+K+ KEV TE+ DVG+ T K V+ G ++N + H+D+ P K Sbjct: 17 QNKIPKEVYTITEMDDVGYPTAPTKAVKKFPTICGVLG---RRNFTILKDHIDLVPQEEK 73 Query: 468 SDGW 479 + W Sbjct: 74 EEAW 77 >12_02_0653 + 21545862-21546584,21546661-21546696,21547182-21547401, 21547590-21548025,21548103-21548273,21548354-21548636, 21548716-21548829,21549012-21549082,21549417-21549429 Length = 688 Score = 28.7 bits (61), Expect = 4.2 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Frame = +3 Query: 294 QDKL-KEVGATTELRDVGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQP-ALK 467 Q+K+ KEV TE+ DVG+ T K V+ G ++N + H+D+ P K Sbjct: 24 QNKIPKEVYTITEVDDVGYPTAPTKAVKKFPTICGVLG---RRNFTILKDHIDLVPQEEK 80 Query: 468 SDGW 479 + W Sbjct: 81 EEAW 84 >01_01_0050 - 382451-382864,382950-383020,383131-383176,383302-383333, 383409-383558,383666-383849,383934-384109,384580-384628, 384724-384923,385515-385548 Length = 451 Score = 28.7 bits (61), Expect = 4.2 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Frame = +3 Query: 408 DPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEKLYGRGSTDDKGPVLGWLHT---I 578 DP+ N+ + Q + + +P+E V+ + + P L W T + Sbjct: 79 DPQPNSTDVAAVASQQAGIANQSAGVQPYETVQAPQAINTGPIVPHAQPQLSWSRTLIGV 138 Query: 579 NAYKGTGAELPVNLKFIF 632 + G GA V LK +F Sbjct: 139 GVFLGVGASAAVILKKLF 156 >11_06_0093 + 19999503-20000231,20000308-20000742,20000829-20001670, 20001748-20001916 Length = 724 Score = 28.3 bits (60), Expect = 5.6 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Frame = +3 Query: 294 QDKL-KEVGATTELRDVGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQP-ALK 467 Q+K+ KEV TE+ DVG+ T K V+ G ++N + H+D+ P K Sbjct: 24 QNKIPKEVYTITEVDDVGYPTAPTKVVKKFPTICGVLG---RRNFTILKDHIDLVPQEEK 80 Query: 468 SDGW 479 + W Sbjct: 81 EEAW 84 >12_01_0857 - 8043765-8043839,8044215-8044497,8044578-8044748, 8044826-8045670,8045828-8046262,8046339-8046563, 8046700-8046781,8046814-8047067 Length = 789 Score = 27.9 bits (59), Expect = 7.4 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +3 Query: 306 KEVGATTELRDVGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQP-ALKSDGW 479 KEV TE+ DVG+ T K V+ G ++N + H+D+ P K + W Sbjct: 29 KEVYTITEVDDVGYPTAPTKAVKKFPTICGVLG---RRNFTILKDHIDLVPQEEKEEAW 84 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,364,172 Number of Sequences: 37544 Number of extensions: 344661 Number of successful extensions: 740 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 722 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 738 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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