Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G24
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93386-5|CAB07646.1|  473|Caenorhabditis elegans Hypothetical pr...   192   1e-49
AC024859-4|AAK29983.4|  472|Caenorhabditis elegans Hypothetical ...   174   5e-44
Z68214-4|CAA92447.1|  397|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z68214-5|CAA92446.2|  397|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z68214-3|CAA92445.1|  399|Caenorhabditis elegans Hypothetical pr...    31   0.54 
AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical...    29   3.8  
Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z66521-11|CAA91398.2|  471|Caenorhabditis elegans Hypothetical p...    28   6.6  
AF067945-16|AAC17675.1|  341|Caenorhabditis elegans Serpentine r...    28   6.6  
AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like ...    28   6.6  

>Z93386-5|CAB07646.1|  473|Caenorhabditis elegans Hypothetical
           protein R11H6.1 protein.
          Length = 473

 Score =  192 bits (469), Expect = 1e-49
 Identities = 89/164 (54%), Positives = 116/164 (70%)
 Frame = +3

Query: 159 LPEIFKYVXXNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 338
           L  +F+ +  + D+ K+LL+EAVAI SVS D   R + IRMVHWM++KL+ +G   EL D
Sbjct: 5   LTNVFQQIDGDYDNLKELLREAVAIQSVSGDPSKRDETIRMVHWMKEKLETIGTICELAD 64

Query: 339 VGFQTIDGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEK 518
           +G Q ++GK V+         G+D  K T+ +YGHLDVQPA KSDGW+TEPFELVE++ K
Sbjct: 65  LGTQELEGKTVKLPPVLLGTLGSDKNKKTLLVYGHLDVQPAAKSDGWDTEPFELVEKDGK 124

Query: 519 LYGRGSTDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECMEES 650
           L+GRGS+DDKGPVL W H I A +  G +LPVN+KF  E MEES
Sbjct: 125 LFGRGSSDDKGPVLCWFHAIRAAQKNGIDLPVNIKFCLEGMEES 168


>AC024859-4|AAK29983.4|  472|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.11 protein.
          Length = 472

 Score =  174 bits (423), Expect = 5e-44
 Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
 Frame = +3

Query: 168 IFKYVXXNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRDVGF 347
           +FK +   +D +  LL+E+VAI SVS D   R DC+RM  W +D+LK +G  T L ++G 
Sbjct: 7   VFKSIDERQDEFIDLLRESVAIQSVSADPARRGDCVRMSEWARDQLKTLGVETSLWELGQ 66

Query: 348 QTI-DGKDVQXXXXXXXXXGNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEKLY 524
           QT+  G+ +          G D  K T+ IYGHLDVQPA K DGW T PFEL E + KL+
Sbjct: 67  QTLPSGEQLPLPPAVFGVYGRDKSKKTLLIYGHLDVQPAEKEDGWNTNPFELTEIDGKLF 126

Query: 525 GRGSTDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECMEES 650
           GRGSTDDKGPV+ W+  +   +  G +LP+N+KF+ ECMEES
Sbjct: 127 GRGSTDDKGPVIAWIAVLKVLQTLGIDLPINIKFVLECMEES 168


>Z68214-4|CAA92447.1|  397|Caenorhabditis elegans Hypothetical
           protein C10C5.4 protein.
          Length = 397

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 402 GNDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDKGPVLGWLHTI 578
           G+ P+  ++ +Y H DV P  + + W  +P+    + +  ++ RG+ D K   LG  H +
Sbjct: 62  GSQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDTK--CLGVQH-V 117

Query: 579 NAYKGTGAE 605
            A++   A+
Sbjct: 118 EAFRNLFAK 126


>Z68214-5|CAA92446.2|  397|Caenorhabditis elegans Hypothetical
           protein C10C5.5 protein.
          Length = 397

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 402 GNDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDK 548
           G+ P+  ++ +Y H DV P  + + W  +P+    + +  ++ RG+ D K
Sbjct: 62  GSQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDMK 110


>Z68214-3|CAA92445.1|  399|Caenorhabditis elegans Hypothetical
           protein C10C5.3 protein.
          Length = 399

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 402 GNDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDK 548
           G+ P+  ++ +Y H DV P  + + W  +P+    + +  ++ RG+ D K
Sbjct: 62  GSQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDMK 110


>AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical
           protein Y53F4B.25 protein.
          Length = 603

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 76  LYHFFLLIINIIQ*VPNKFLQKWQRKKHCLKFLNTXIXIKILISN 210
           L+HFFL + NI+  +PN  L     KK+C   L     + +LI N
Sbjct: 5   LHHFFLKLSNIV--LPNLLLNILYNKKNCKMRLWILGLLWVLIEN 47


>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 361 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 257
           PS++    ++ SV+A  S+NL  +   IR  +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 361 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 257
           PS++    ++ SV+A  S+NL  +   IR  +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 361 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 257
           PS++    ++ SV+A  S+NL  +   IR  +A+Y
Sbjct: 48  PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 82


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 361 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 257
           PS++    ++ SV+A  S+NL  +   IR  +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184


>Z66521-11|CAA91398.2|  471|Caenorhabditis elegans Hypothetical
           protein W02B12.7 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +3

Query: 96  YHQHYSVSSKQVSAKMATEKTLPEIFKYVXXNKDSYKQLLKEAVAIPSVSC 248
           Y+ H +    Q++       T+P++   +   K+  K L +E+   PS SC
Sbjct: 11  YNNHTNDLKHQIAQLERKTATIPKLENQLHKAKNQNKVLRRESALFPSASC 61


>AF067945-16|AAC17675.1|  341|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 12 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 88  FLLIINIIQ*VPNKFLQKWQRKKH 159
           FL+I+N+   + N+FL+ W  KK+
Sbjct: 172 FLMILNLFALLTNQFLRTWNLKKY 195


>AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +3

Query: 96  YHQHYSVSSKQVSAKMATEKTLPEIFKYVXXNKDSYKQLLKEAVAIPSVSC 248
           Y+ H +    Q++       T+P++   +   K+  K L +E+   PS SC
Sbjct: 145 YNNHTNDLKHQIAQLERKTATIPKLENQLHKAKNQNKVLRRESALFPSASC 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,346,454
Number of Sequences: 27780
Number of extensions: 319296
Number of successful extensions: 833
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)