BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_G21 (548 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 184 9e-46 UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 135 7e-31 UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 117 2e-25 UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 115 8e-25 UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 100 4e-20 UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 99 8e-20 UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 97 2e-19 UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 93 3e-18 UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 66 5e-10 UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 63 5e-09 UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 59 8e-08 UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 55 1e-06 UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 50 4e-05 UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 49 6e-05 UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 46 4e-04 UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 46 6e-04 UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 46 6e-04 UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis... 45 0.001 UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 45 0.001 UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 43 0.004 UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639... 42 0.009 UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 40 0.029 UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick... 40 0.029 UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 40 0.029 UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putati... 40 0.050 UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter... 40 0.050 UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps... 39 0.066 UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol... 38 0.12 UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 38 0.15 UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; ... 38 0.20 UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 36 0.82 UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=... 35 1.1 UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=... 35 1.4 UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;... 34 1.9 UniRef50_Q8W9P7 Cluster: Ribosomal protein S11; n=1; Mesostigma ... 33 3.3 UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; ... 33 4.4 UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein ... 33 5.8 UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma ... 32 7.6 >UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular organisms|Rep: 40S ribosomal protein S14 - Homo sapiens (Human) Length = 151 Score = 184 bits (449), Expect = 9e-46 Identities = 92/135 (68%), Positives = 98/135 (72%) Frame = +3 Query: 42 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 221 MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60 Query: 222 KVKADRDEASPYAAMLAAQDVXXKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 401 KVKADRDE+SPYAAMLAAQDV +CK LGITALHIKLRA AQ Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120 Query: 402 XXXMXIGRIEDVTPV 446 M IGRIEDVTP+ Sbjct: 121 RSGMKIGRIEDVTPI 135 >UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania major|Rep: 40S ribosomal protein S14 - Leishmania major Length = 203 Score = 135 bits (326), Expect = 7e-31 Identities = 63/90 (70%), Positives = 74/90 (82%) Frame = +3 Query: 69 KEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEA 248 K+EV+ GP G+ V+GV HIFASFNDTFVHVTD+SGRET +VTGGMKVKADRDE+ Sbjct: 13 KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDES 71 Query: 249 SPYAAMLAAQDVXXKCKTLGITALHIKLRA 338 SPYAAM+AAQDV +CK GI ALH+K+RA Sbjct: 72 SPYAAMMAAQDVVARCKECGINALHVKMRA 101 >UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreococcus tauri|Rep: 40S ribosomal protein S14 - Ostreococcus tauri Length = 243 Score = 117 bits (281), Expect = 2e-25 Identities = 57/92 (61%), Positives = 64/92 (69%) Frame = +3 Query: 168 HVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTLGITALHIKLRAXXX 347 HVTDLSG+ET++R TGGMKVKADRDE+SPYAAMLAAQDV +CK LGITALHIK+RA Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRAKGG 149 Query: 348 XXXXXXXXXAQXXXXXXXXXXMXIGRIEDVTP 443 Q + IGRIEDVTP Sbjct: 150 NKTKSPGPGGQSALRALSRSGIKIGRIEDVTP 181 Score = 48.8 bits (111), Expect = 8e-05 Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = +3 Query: 51 RKNKVAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 167 R V+ V T +GPQ GE VFGVAHIFASFNDTFV Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44 >UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep: Ribosomal protein S14 - Palaemonetes pugio Length = 77 Score = 115 bits (276), Expect = 8e-25 Identities = 55/70 (78%), Positives = 58/70 (82%) Frame = +3 Query: 42 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 221 MAPRK K KEEVQV LGPQ GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60 Query: 222 KVKADRDEAS 251 KVKADRDE+S Sbjct: 61 KVKADRDESS 70 >UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archaea|Rep: 30S ribosomal protein S11P - Methanococcus jannaschii Length = 129 Score = 99.5 bits (237), Expect = 4e-20 Identities = 49/108 (45%), Positives = 64/108 (59%) Frame = +3 Query: 123 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKT 302 +G+ HI++S+N+T +H TD++G ETIARV+GG + RDE SPYAAM AA + K Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKE 68 Query: 303 LGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMXIGRIEDVTPV 446 GI +HIK+RA AQ + IGRIEDVTPV Sbjct: 69 RGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPV 116 >UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella natans|Rep: Ribosomal protein S14 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 145 Score = 98.7 bits (235), Expect = 8e-20 Identities = 47/108 (43%), Positives = 61/108 (56%) Frame = +3 Query: 120 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCK 299 +FG+ HI ++ NDT +HVTD++G ETI+R++ G+ +D+ S Y AMLA Q V CK Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCK 70 Query: 300 TLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMXIGRIEDVTP 443 LGI ALHIK+RA A IGRIED TP Sbjct: 71 VLGINALHIKIRARGGNASHLISTGAHTVVTTLVRLGFKIGRIEDTTP 118 >UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermoprotei|Rep: 30S ribosomal protein S11P - Cenarchaeum symbiosum Length = 198 Score = 97.5 bits (232), Expect = 2e-19 Identities = 46/117 (39%), Positives = 67/117 (57%) Frame = +3 Query: 96 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 275 P+ + G+AHI++S+N+T +H+TDL+G ET++ +GG+ V ADR E+SP+AAM AA Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAA 125 Query: 276 QDVXXKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMXIGRIEDVTPV 446 V + G T HI++RA AQ IGRI+DVTP+ Sbjct: 126 NKVIESARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPI 182 >UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 - uncultured euryarchaeote ARMAN-2 Length = 169 Score = 93.5 bits (222), Expect = 3e-18 Identities = 48/108 (44%), Positives = 63/108 (58%) Frame = +3 Query: 123 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKT 302 + VAH+++S NDT + +TDLSG ETIA +GGM V AD E SPYAAM AA V + K Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKE 105 Query: 303 LGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMXIGRIEDVTPV 446 GIT ++I++RA AQ + + RIEDVTP+ Sbjct: 106 KGITNINIEIRAPGGHGSKTPGHGAQAVVRVLARSGLRVNRIEDVTPI 153 >UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_246, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 182 Score = 66.1 bits (154), Expect = 5e-10 Identities = 31/49 (63%), Positives = 36/49 (73%) Frame = +3 Query: 192 ETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTLGITALHIKLRA 338 ET+ R TGGMK K D +E+SP AAM AAQDV +CK L IT LH+KL A Sbjct: 50 ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDITVLHVKLHA 98 >UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape) Length = 104 Score = 62.9 bits (146), Expect = 5e-09 Identities = 31/49 (63%), Positives = 36/49 (73%) Frame = +3 Query: 192 ETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTLGITALHIKLRA 338 ET+ R TGGMK KAD +E+SP AAM AAQDV + K L IT LH+KL A Sbjct: 29 ETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKELDITVLHVKLHA 77 >UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein S14 - Homo sapiens (Human) Length = 350 Score = 58.8 bits (136), Expect = 8e-08 Identities = 28/40 (70%), Positives = 32/40 (80%) Frame = +3 Query: 219 MKVKADRDEASPYAAMLAAQDVXXKCKTLGITALHIKLRA 338 MK +AD+DE+SP AML AQDV +CK LGITALHIKL A Sbjct: 1 MKEQADQDESSPCTAMLTAQDVVQRCKELGITALHIKLLA 40 >UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1; Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry - Rattus norvegicus Length = 119 Score = 54.8 bits (126), Expect = 1e-06 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Frame = +3 Query: 84 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVKADRDEASPYA 260 ++L PQ + G+ V GV +IFASF D+F++ TD+ G+ T VT MK + E +P Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ--YAETNPCH 62 Query: 261 AMLA-AQDVXXKCKTLGITALHIKLR 335 + A DV + K + + ALHI+L+ Sbjct: 63 RLHAGCLDVTHRFKEMSVPALHIRLQ 88 >UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter pomeroyi Length = 130 Score = 50.0 bits (114), Expect = 4e-05 Identities = 24/70 (34%), Positives = 42/70 (60%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 GVAH+ ++FN+T + ++D+ G G M K R +++PYAA LAA+D K + Sbjct: 20 GVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKAQDH 78 Query: 306 GITALHIKLR 335 G+ L ++++ Sbjct: 79 GVKTLEVEVQ 88 >UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; Oryza sativa|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice) Length = 332 Score = 49.2 bits (112), Expect = 6e-05 Identities = 22/31 (70%), Positives = 25/31 (80%) Frame = +3 Query: 207 VTGGMKVKADRDEASPYAAMLAAQDVXXKCK 299 V GGMK+KAD DE+SPYAAML +QDV CK Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241 >UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular organisms|Rep: Ribosomal protein S11 - Chlorokybus atmophyticus (Soil alga) Length = 262 Score = 46.4 bits (105), Expect = 4e-04 Identities = 26/70 (37%), Positives = 37/70 (52%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 GVAHI + N+T + +TDL G +G + K R + S YAA AA+ K L Sbjct: 152 GVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAKKSIQL 210 Query: 306 GITALHIKLR 335 GI + +K+R Sbjct: 211 GIKDVTVKIR 220 >UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus mutans Length = 127 Score = 46.0 bits (104), Expect = 6e-04 Identities = 21/70 (30%), Positives = 39/70 (55%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+AHI A+FN+T V +TD+ G G + K R +++P+AA +AA+ + Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEH 75 Query: 306 GITALHIKLR 335 G+ + + ++ Sbjct: 76 GLKTVEVTVK 85 >UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular organisms|Rep: 30S ribosomal protein S11 - Shewanella oneidensis Length = 130 Score = 46.0 bits (104), Expect = 6e-04 Identities = 23/67 (34%), Positives = 37/67 (55%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+AHI ASFN+T V +TD G +GG + R +++P+AA +AA+ + Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAAAQDY 78 Query: 306 GITALHI 326 G+ L + Sbjct: 79 GLKNLEV 85 >UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis vadensis ATCC BAA-548|Rep: Ribosomal protein S11 - Victivallis vadensis ATCC BAA-548 Length = 148 Score = 45.2 bits (102), Expect = 0.001 Identities = 30/107 (28%), Positives = 49/107 (45%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+A++ A+FN+T V TDL G I TGG +++ YAA + A D K + + Sbjct: 38 GIAYVLATFNNTKVTFTDLHG-NVICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLV 96 Query: 306 GITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMXIGRIEDVTPV 446 G+ + ++++ A M I I+D+TPV Sbjct: 97 GMKEVEVRIKGPGAGRESAVRGIA--------AAGMEISTIKDITPV 135 >UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular organisms|Rep: 30S ribosomal protein S11 - Polaromonas sp. (strain JS666 / ATCC BAA-500) Length = 134 Score = 45.2 bits (102), Expect = 0.001 Identities = 22/70 (31%), Positives = 39/70 (55%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+AH+ ASFN+T + +TD G +GG K R +++P+AA +A++ Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAAIEQ 82 Query: 306 GITALHIKLR 335 GI L ++++ Sbjct: 83 GIKNLDVEIK 92 >UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular organisms|Rep: 30S ribosomal protein S11 - Acidobacteria bacterium (strain Ellin345) Length = 142 Score = 43.2 bits (97), Expect = 0.004 Identities = 22/69 (31%), Positives = 39/69 (56%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+AHI ASFN+T V ++D SG + +G + + R + +P+AA AA + Sbjct: 32 GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQAAMTAANMARDH 90 Query: 306 GITALHIKL 332 G+ +L +++ Sbjct: 91 GMRSLDVRV 99 >UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639; n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized protein PH1639 - Pyrococcus horikoshii Length = 102 Score = 41.9 bits (94), Expect = 0.009 Identities = 28/98 (28%), Positives = 41/98 (41%) Frame = -1 Query: 446 NGGDIFNAANXHT*TSKSPKCRLSTRTRGLCFVSTSSTELYVQGRYAKSFAFLXYILCRQ 267 N ++ N + + S+ P C L T R F S+ V + F + Sbjct: 3 NWSNVLNPSYFKSCPSQGPNCSLCTWPRSFAFASSWGPHPNVNTDNSLFQCFFCCSPSSK 62 Query: 266 HSSVG*RFITVSLHLHATSDTGDSFPAG*ISNMNECVI 153 H +G R I VS + H T+ + F G ISN+N VI Sbjct: 63 HCCIGGRLIPVSFNYHTTAPSAYRFRTGDISNVNNGVI 100 >UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus oeni ATCC BAA-1163|Rep: Ribosomal protein S11 - Oenococcus oeni ATCC BAA-1163 Length = 113 Score = 40.3 bits (90), Expect = 0.029 Identities = 20/51 (39%), Positives = 31/51 (60%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQ 278 GVAHI ++FN+T V +TD +G G + K R +++P+AA LA + Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGE 71 >UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal protein S11 - Neorickettsia sennetsu (strain Miyayama) Length = 120 Score = 40.3 bits (90), Expect = 0.029 Identities = 21/71 (29%), Positives = 38/71 (53%) Frame = +3 Query: 120 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCK 299 V G AH+ +FN+ ++ VTD G +G + K ++ +++ YAA A + K K Sbjct: 8 VSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNK-KSTAYAAQSVATTLMTKLK 66 Query: 300 TLGITALHIKL 332 +G+ L++ L Sbjct: 67 RIGLKILNVHL 77 >UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular organisms|Rep: 30S ribosomal protein S11 - Bacillus subtilis Length = 131 Score = 40.3 bits (90), Expect = 0.029 Identities = 20/70 (28%), Positives = 37/70 (52%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+AHI ++FN+T V +TD G G + + R +++P+AA +AA+ Sbjct: 21 GIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMAAETAAKGSIEH 79 Query: 306 GITALHIKLR 335 G+ L + ++ Sbjct: 80 GLKTLEVTVK 89 >UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putative; n=19; Spermatophyta|Rep: Small subunit ribosomal protein, putative - Oryza sativa subsp. japonica (Rice) Length = 366 Score = 39.5 bits (88), Expect = 0.050 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = +3 Query: 135 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTLGIT 314 H+ N TFV VTD+ G + G ++ + R S YAA A+ V + +G+ Sbjct: 248 HVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLK 307 Query: 315 ALHIKLR 335 ++ +K++ Sbjct: 308 SVVMKVK 314 >UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma pulmonis Length = 136 Score = 39.5 bits (88), Expect = 0.050 Identities = 23/70 (32%), Positives = 38/70 (54%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 GVAHI ++ N+T V +D G +G + K + + + YAA LAAQ+ K K Sbjct: 21 GVAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTA-YAAGLAAQNASEKAKEH 79 Query: 306 GITALHIKLR 335 GI + ++++ Sbjct: 80 GIREVSVRVK 89 >UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps11 - Ostreococcus tauri Length = 121 Score = 39.1 bits (87), Expect = 0.066 Identities = 23/66 (34%), Positives = 33/66 (50%) Frame = +3 Query: 138 IFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTLGITA 317 I + N+TFV++TDL G +G + K + ++S YAA + V C I Sbjct: 15 ISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSK-KSSSYAAQSTTEKVLQFCAQQSIEK 73 Query: 318 LHIKLR 335 L IKLR Sbjct: 74 LMIKLR 79 >UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole genome shotgun sequence; n=3; cellular organisms|Rep: Chromosome undetermined SCAF14706, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 215 Score = 38.3 bits (85), Expect = 0.12 Identities = 18/69 (26%), Positives = 39/69 (56%) Frame = +3 Query: 129 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTLG 308 +AH+ A++N+T + VTD +G+ ++ R + G + + +++P AA A K G Sbjct: 106 IAHVKATYNNTHIQVTDSAGK-SMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKG 164 Query: 309 ITALHIKLR 335 +T + + ++ Sbjct: 165 VTFVRVVVK 173 >UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal protein S11 - Arabidopsis thaliana (Mouse-ear cress) Length = 138 Score = 37.9 bits (84), Expect = 0.15 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 GV H+ ASFN+T V VTD+ GR G + R +P+AA AA + Sbjct: 28 GVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTR-RGTPFAAQTAAGNAIRAVVDQ 86 Query: 306 GITALHIKLR 335 G+ ++++ Sbjct: 87 GMQRAEVRIK 96 >UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; Magnoliophyta|Rep: Small subunit ribosomal protein - Berberis thunbergii (Japanese barberry) Length = 150 Score = 37.5 bits (83), Expect = 0.20 Identities = 19/69 (27%), Positives = 33/69 (47%) Frame = +3 Query: 129 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTLG 308 + H+ N+TFV VTD G + G ++ S YAA A+ V + LG Sbjct: 46 LVHLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLG 105 Query: 309 ITALHIKLR 335 + ++ +K++ Sbjct: 106 MKSVVMKVK 114 >UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4; Streptophyta|Rep: Plastid 30S ribosomal protein S11 - Epifagus virginiana (Beechdrops) Length = 136 Score = 35.5 bits (78), Expect = 0.82 Identities = 20/50 (40%), Positives = 26/50 (52%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 275 GV H+ SFN+T V VTD+ GR G K R + +AA +AA Sbjct: 28 GVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTR-RGTSFAAQIAA 76 >UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=2; Arabidopsis thaliana|Rep: 30S ribosomal protein S11, putative - Arabidopsis thaliana (Mouse-ear cress) Length = 235 Score = 35.1 bits (77), Expect = 1.1 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +3 Query: 114 ETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXK 293 ET + HI N+TFV VTD G +G + + + Y A A+++ + Sbjct: 111 ETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRR 170 Query: 294 CKTLGITALHIKL 332 K +G+ ++ +K+ Sbjct: 171 AKAMGLKSVVVKV 183 >UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1; Prototheca wickerhamii|Rep: Mitochondrial ribosomal protein S11 - Prototheca wickerhamii Length = 128 Score = 34.7 bits (76), Expect = 1.4 Identities = 19/70 (27%), Positives = 36/70 (51%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+ HI ++ N+T + +TDL G G + K R +++ YA+ AA+ + K Sbjct: 18 GIVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSR-KSTVYASGAAAEALASKAFNE 76 Query: 306 GITALHIKLR 335 G + +K++ Sbjct: 77 GYRTIIVKIK 86 >UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1; Plasmodium knowlesi|Rep: 205 kDa Pk1(B+)1+ SICAvar antigen - Plasmodium knowlesi Length = 1759 Score = 34.3 bits (75), Expect = 1.9 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = +2 Query: 272 GTGCXXEMQNSWHNGLAHKAPCYWWKQNKDPWSWCSVCTSGS 397 GT NS NG H PC+W K +K W C + TSGS Sbjct: 212 GTKPGTSCHNS--NGKEHCVPCHWDKDDK--WKDCKITTSGS 249 >UniRef50_Q8W9P7 Cluster: Ribosomal protein S11; n=1; Mesostigma viride|Rep: Ribosomal protein S11 - Mesostigma viride Length = 128 Score = 33.5 bits (73), Expect = 3.3 Identities = 19/70 (27%), Positives = 35/70 (50%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+ H+ + N+T + +TD G TI + GM + + +A+ AQ + +CK L Sbjct: 18 GILHVQTTLNNTIMTLTDRKG-NTIFGFSSGMLGFGGSRKKTRFASRSVAQHMVLRCKQL 76 Query: 306 GITALHIKLR 335 I L + ++ Sbjct: 77 RIQRLILAIK 86 >UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; n=10; cellular organisms|Rep: Chloroplast 30S ribosomal protein S11 - Cyanidium caldarium Length = 129 Score = 33.1 bits (72), Expect = 4.4 Identities = 20/69 (28%), Positives = 34/69 (49%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTL 305 G+ I ++FN+T V TD G+ IA +GG + + +P+AA A + + Sbjct: 19 GLIIINSTFNNTIVTATDCYGK-VIAWASGGTEGFKGAKKGTPFAAQSATEKLIKALLEQ 77 Query: 306 GITALHIKL 332 G +HI + Sbjct: 78 GTQRIHISV 86 >UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein isoform 1; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: hypothetical protein isoform 1 - Strongylocentrotus purpuratus Length = 261 Score = 32.7 bits (71), Expect = 5.8 Identities = 19/69 (27%), Positives = 37/69 (53%) Frame = +3 Query: 129 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVXXKCKTLG 308 + +I A++N+T V V + +GR T+AR + G + + + + AA AA K G Sbjct: 152 IVNIKATYNNTHVSVAEHTGR-TVARTSCGTEGFKNAKKGTAIAAQTAAIAAATKAVDKG 210 Query: 309 ITALHIKLR 335 + A+ + ++ Sbjct: 211 MNAVRVVIK 219 >UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma capricolum|Rep: 30S ribosomal protein - Mycoplasma capricolum Length = 80 Score = 32.3 bits (70), Expect = 7.6 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +3 Query: 126 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYA 260 G+AHI ++FN+T V V+D G G + K + +++PYA Sbjct: 11 GIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSK-KSTPYA 54 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 522,792,913 Number of Sequences: 1657284 Number of extensions: 10348290 Number of successful extensions: 23362 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 22415 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 23347 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 35822246242 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -