Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G21
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.8  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   8.8  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 435 HLQCGQXSYLNEQEPEVQTEHQDQ 364
           HL  G+ S    Q+ ++Q  HQ Q
Sbjct: 611 HLMAGKESISQHQQSQLQHSHQAQ 634


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 63  VAKEEVQVTLGPQHLVGETVFGVAHIFASF 152
           V   ++++TL   +  G+ VFG A +  S+
Sbjct: 240 VTATDIRITLDRLNTFGDEVFGDAQVLKSY 269


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 123 TLFRPLNAGARGSPGPP 73
           T +R + +  RGSPGPP
Sbjct: 433 TGYRVVMSRLRGSPGPP 449


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -1

Query: 524 HIEL--NLKADYSXRPLRPPFVRVESDGNGGDIF 429
           H+E+   LKAD   +      VR+    NGG +F
Sbjct: 269 HVEILRKLKADPELQAFGKKVVRIRGTKNGGLLF 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,675
Number of Sequences: 2352
Number of extensions: 12134
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)