Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G16
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    27   0.18 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    27   0.18 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.9  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 522 FPKSKRTSCTIYGS-RRLTYHQGTRSCLVSEQVSALKVADVL 400
           FPK K   C I+G+   LT  +G R C         K+  +L
Sbjct: 32  FPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLAKITTIL 73


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 522 FPKSKRTSCTIYGS-RRLTYHQGTRSCLVSEQVSALKVADVL 400
           FPK K   C I+G+   LT  +G R C         K+  +L
Sbjct: 28  FPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLAKITTIL 69


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 407 SATFSAETCSLTKQERVPWWYVNLLEPYM 493
           S    +  CS T  + +  +YVN+  P++
Sbjct: 481 SRAIDSVACSKTVSDGIRHYYVNVTFPHL 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,813
Number of Sequences: 336
Number of extensions: 3931
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)