Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_G16
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 36 0.019
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 35 0.058
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 33 0.18
Z81078-4|CAJ15165.1| 392|Caenorhabditis elegans Hypothetical pr... 32 0.41
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 30 1.6
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 30 1.6
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 30 1.6
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 30 1.6
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 30 1.6
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 30 1.6
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 2.9
AF016675-3|AAB66138.2| 396|Caenorhabditis elegans Hypothetical ... 29 3.8
U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 28 5.0
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC024785-2|AAF60599.2| 467|Caenorhabditis elegans C-type lectin... 28 6.7
Z73912-3|CAE18063.1| 828|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z73912-2|CAA98144.4| 859|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF101305-5|AAF98597.2| 341|Caenorhabditis elegans Serpentine re... 27 8.8
AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical ... 27 8.8
AB096633-1|BAC76733.1| 828|Caenorhabditis elegans leucyl-tRNA s... 27 8.8
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 62.1 bits (144), Expect = 3e-10
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +2
Query: 149 CNFPGAPAHCHVTFSNDS-LTEGTSAWYECDRGFELLGPSRRVCTXDGTWIPEGIPFCVL 325
C P P + HV F+ T A Y C GF+L+G R C DG+W E P C +
Sbjct: 161 CLQPYVPENAHVIFNEPGPYATDTVAKYSCALGFDLIGSEERTCLSDGSWSDEP-PICAI 219
Query: 326 NVAAGKAPMQISTEDSGVPQRALDGSTSATFSAETCSLTKQERVPWWYVNLLEPYMVQLV 505
+VA K P+ T+ SG +L G+ C++T E +W V+LL Y ++ +
Sbjct: 220 DVAYNK-PV---TQSSGNVAMSLGGT--------MCTMTNDESKSFWEVDLLGDYSIRSI 267
Query: 506 RLDFG 520
+ G
Sbjct: 268 SMRLG 272
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = +2
Query: 149 CNFPGAPAHCHVTFSNDSLTEGTSAWYECDRGFELLGPSRRVCTXDGTWIPEGIPFC 319
C PG VTFS+ S GT +Y CD G++L G +R C +G W IP C
Sbjct: 479 CTSPGVGEATKVTFSSHSYAIGTLCFYSCDSGYDLHGIRQRECAENGRW-TGSIPNC 534
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 197 DSLTEGTSAWYECDRGFELLGPSRRVCTXDGTWIPEGIPFC 319
+S T ++A Y C +GF L+GP +C G W P PFC
Sbjct: 620 ESSTFESAANYTCHQGFRLIGPESLMCGDRGEWQP-ATPFC 659
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Frame = +2
Query: 227 YECDRGFELLG---PS----RRVCTXDGTWIPEGIPFCVLNVAAGKAPM 352
YEC G+ L PS RRVC DG W P C L V G+ P+
Sbjct: 565 YECSNGWHLANSPSPSYRSLRRVCQSDGIW-SGSEPTCEL-VDCGRPPL 611
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 149 CNFPGAPAHCHVTFSNDSLTEGTSAWYECDRGFELLGPSRRVCTXDGTW 295
C+ P +P H V S SLT + Y CD G+ L+G +R+C +G W
Sbjct: 204 CSRPSSPLHGKVVGS--SLTYQSVVTYSCDHGYRLVGQVQRICLAEGIW 250
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 209 EGTSAWYECDRGFELLGPSRRVCTXDGTWIPEGIPFCV 322
EG + ++C +G L+GP + C +G W+P+ P CV
Sbjct: 474 EGRAISFQCGKGNYLIGPPKATCV-NGEWMPKVSPKCV 510
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 227 YECDRGFELLGPSRRVCTXDGTWIPE 304
Y C+ GF L+G + R C+ +G W E
Sbjct: 170 YSCNPGFLLVGSTSRQCSSNGEWTNE 195
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical
protein F36H2.3 protein.
Length = 1388
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +2
Query: 182 VTFSNDSLTE---GTSAWYECDRGFELLGPSRRVCTXDGTWIP--EGIPFCVLNVAAGKA 346
+ +SND L GTSA EC +GF GPS VCT +G W P E + CV + K+
Sbjct: 204 ILYSNDQLNVFSIGTSATLECHQGFAGNGPSSLVCTKNG-WYPKREDLGSCVRLEQSNKS 262
Query: 347 PMQISTE 367
+ ++++
Sbjct: 263 RLLVASD 269
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Frame = +2
Query: 170 AHCHVTFSND--------SLTEGTSAWYECDRGFELLGPSRRVCTXDGTWIPEGIPFC 319
AHC F N S G A ++C +GF L+G CT GTW P+C
Sbjct: 519 AHCPAVFVNGTRMTVTVTSYRTGGVAHFKCHKGFTLIGEQNLHCTTQGTW-SHDFPYC 575
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +2
Query: 191 SNDSLTEGTSAWYECDRGFELLGPSRRVCTXDGTWIPEG--IP-FCVLN-VAAGKAPMQI 358
SND + +GT A C RGF L G C P G +P C+L+ + GK
Sbjct: 62 SNDVVEDGTVAQMACLRGFHLSGNGVLECIKGDLREPLGHCVPQECILSELIVGKYNTTA 121
Query: 359 STEDSGVPQRALDGSTSATFSAETCSL 439
T +G + T+ T S SL
Sbjct: 122 ETIKNGEKVLLMCTGTNVTISCSKGSL 148
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 137 VSAACNFPGAPAHCHVTFSNDSLTEGTSAWYECDRGFELLGPSRRVCTXDGTWIPEGIPF 316
V C+ G+P + + + + ++C G++++GP C DGTW PF
Sbjct: 689 VPRQCSHIGSPENGQLLSTAERFEYPMIVQFQCAFGYQMMGPDYIQCLADGTWNGTE-PF 747
Query: 317 CVLNVAAG 340
C+ G
Sbjct: 748 CLSATCQG 755
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +2
Query: 197 DSLTEGTSAWYECDRGFELLGPSRRVCTXDGTWIPEGIPFCVLNVAAGKAPMQISTEDSG 376
D G+ ++C G+ G +C DGTW + P C VA P +++
Sbjct: 363 DGTGYGSVFRFDCHSGYRREGVESSLCKSDGTWSSKQ-PNCT-KVACTHLP-EVANAKIE 419
Query: 377 VPQRALDGSTS 409
VP R L G +
Sbjct: 420 VPDRFLFGDVA 430
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +2
Query: 140 SAACNFPGAPAHCHVTFSNDSLTEGTSAWYECDRGFELL---GPSRRV-CTXDGTWIPEG 307
S + + P P VT S + T EC GFE G S+ V C GTW
Sbjct: 217 SYSIDCPAFPTVPMVTLSTKQRSVNTKVTVECPIGFEFASGEGVSKTVECLIGGTWSQSQ 276
Query: 308 IPFC 319
I C
Sbjct: 277 ISTC 280
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 128 QGYVSAACNFPGAPAHCHVTFSNDSLTEGTSAWYECDRGFELLGPSRRVCTXDGTWIP 301
+GY+ C F P C + L G + W + D G L PS +CT T IP
Sbjct: 511 EGYIGKFCQFTTIPRSCAEAYDFLKLPNG-ATWVDVD-GNRKLDPSVTMCTDGQTEIP 566
>Z81078-4|CAJ15165.1| 392|Caenorhabditis elegans Hypothetical
protein F36H2.5 protein.
Length = 392
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +2
Query: 149 CNFPGAPAHCHVTFSNDS----LTEGTSAWYECDRGFELLGPSRRVC 277
C P APA +TFS S +GT+A +C+ G++ GPS C
Sbjct: 259 CPPPIAPAFGEITFSGFSTKGTFEDGTTAALKCNLGYKPTGPSFSTC 305
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +2
Query: 179 HVTFSND---SLTEGTSAWYECDRGFELL-GPSRRVCTXDGTWIPEGIPFC 319
H TFS S T GT CD + G + +CT +G W P+ + C
Sbjct: 25 HGTFSYSVAGSFTTGTIVTLRCDTNYAATNGDTSAICT-NGVWSPKSLAMC 74
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 324 RTQNGIPSGIHVPSXVHTLLEGPSSSKPRSHSYQAEVPSVR 202
+T NG +G S VH GPSS + R H + A + + R
Sbjct: 25 KTANGSANGSANGSAVHAANGGPSSQQARGHEHGAALVNAR 65
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform b
protein.
Length = 4203
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 324 RTQNGIPSGIHVPSXVHTLLEGPSSSKPRSHSYQAEVPSVR 202
+T NG +G S VH GPSS + R H + A + + R
Sbjct: 26 KTANGSANGSANGSAVHAANGGPSSQQARGHEHGAALVNAR 66
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 324 RTQNGIPSGIHVPSXVHTLLEGPSSSKPRSHSYQAEVPSVR 202
+T NG +G S VH GPSS + R H + A + + R
Sbjct: 263 KTANGSANGSANGSAVHAANGGPSSQQARGHEHGAALVNAR 303
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 324 RTQNGIPSGIHVPSXVHTLLEGPSSSKPRSHSYQAEVPSVR 202
+T NG +G S VH GPSS + R H + A + + R
Sbjct: 263 KTANGSANGSANGSAVHAANGGPSSQQARGHEHGAALVNAR 303
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 324 RTQNGIPSGIHVPSXVHTLLEGPSSSKPRSHSYQAEVPSVR 202
+T NG +G S VH GPSS + R H + A + + R
Sbjct: 263 KTANGSANGSANGSAVHAANGGPSSQQARGHEHGAALVNAR 303
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 324 RTQNGIPSGIHVPSXVHTLLEGPSSSKPRSHSYQAEVPSVR 202
+T NG +G S VH GPSS + R H + A + + R
Sbjct: 26 KTANGSANGSANGSAVHAANGGPSSQQARGHEHGAALVNAR 66
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/93 (24%), Positives = 39/93 (41%)
Frame = +2
Query: 296 IPEGIPFCVLNVAAGKAPMQISTEDSGVPQRALDGSTSATFSAETCSLTKQERVPWWYVN 475
+P G+ ++ AP ST + + + T S + S Q W +
Sbjct: 1136 LPSGMVIHRVHAMDSDAPGAASTVNYQISNPS--DVTDDVISVNSTSGVVQISGSLWGMP 1193
Query: 476 LLEPYMVQLVRLDFGKPCCGTNKPAVIVVRVGN 574
+PY Q++ DFG P G N +++ +RV N
Sbjct: 1194 REQPYKFQVIAQDFGAP--GLNSTSILSLRVRN 1224
>AF016675-3|AAB66138.2| 396|Caenorhabditis elegans Hypothetical
protein T27B7.6 protein.
Length = 396
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 541 VRSTTRLPEVQTNELHHIRLEEVNVPPGHTLLFSQRASLSAEGSRCAAVQRTLWYS 374
+R + E+ N+LHH +EE+N P F + A L + A+QR +W S
Sbjct: 319 LRVAEQFQEILANDLHHYYVEEMNRP----RYFQRLARLLKVNN---AIQRAIWES 367
>U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform a protein.
Length = 977
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 568 DAHDNDSGFVRSTTRLPEVQTNELHHIRLEEVNVPPGHTLLF 443
D H +SG + + L +VQ HH++L+ +V H L+
Sbjct: 729 DFHVGNSGPAKRSPSLEQVQLQMTHHLKLKSNDVDLDHEKLY 770
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -1
Query: 273 TLLEGPSSSKPRSHSYQAEVPSVRLSLENVTWQWAGAPGK 154
T E P++S+PRSHS A P+ RL L T AP +
Sbjct: 63 TTPEAPTTSEPRSHSRDAR-PTQRLPLTWSTVTPTAAPSQ 101
>AC024785-2|AAF60599.2| 467|Caenorhabditis elegans C-type lectin
protein 71 protein.
Length = 467
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 377 VPQRALDGSTSATFSAETCSLTKQERVPWWYVNLLEPYMVQ 499
V Q+A T+ T + C ++ V + Y N EPY+VQ
Sbjct: 152 VTQKATTPGTTTTAANVNCQFGARQTVLFAYSNDFEPYIVQ 192
>Z73912-3|CAE18063.1| 828|Caenorhabditis elegans Hypothetical
protein ZK524.3b protein.
Length = 828
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 245 FELLGPSRRVCTXDGTWIPEGIPFCVLNVAAGKAPMQISTEDSGVP 382
F +L S + D T P +PF VLN G+ I ED+ P
Sbjct: 255 FLVLKQSHSLADKDATQFPYKLPFQVLNGVTGRQIPVIVVEDTYQP 300
>Z73912-2|CAA98144.4| 859|Caenorhabditis elegans Hypothetical
protein ZK524.3a protein.
Length = 859
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 245 FELLGPSRRVCTXDGTWIPEGIPFCVLNVAAGKAPMQISTEDSGVP 382
F +L S + D T P +PF VLN G+ I ED+ P
Sbjct: 286 FLVLKQSHSLADKDATQFPYKLPFQVLNGVTGRQIPVIVVEDTYQP 331
>AF101305-5|AAF98597.2| 341|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 3 protein.
Length = 341
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -2
Query: 380 VLHCLPLKFALVPSRLPRLERK 315
V+HCLPL + ++ + + R++RK
Sbjct: 277 VIHCLPLYYIILAALITRVDRK 298
>AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical
protein Y32G9A.6 protein.
Length = 840
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 320 VLNVAAGKAPMQISTEDSGVPQRALDGSTSATFSAETCSLTKQE 451
+ +V + I + DS P+R STS T E S+ K+E
Sbjct: 462 IADVGVNTSQRSIKSADSNAPKRKYSKSTSVTNLTEIPSIPKKE 505
>AB096633-1|BAC76733.1| 828|Caenorhabditis elegans leucyl-tRNA
synthetase (mitochondrial)protein.
Length = 828
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 245 FELLGPSRRVCTXDGTWIPEGIPFCVLNVAAGKAPMQISTEDSGVP 382
F +L S + D T P +PF VLN G+ I ED+ P
Sbjct: 255 FLVLKQSHSLADKDATQFPYKLPFQVLNGVTGRQIPVIVVEDTYQP 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,450,446
Number of Sequences: 27780
Number of extensions: 367670
Number of successful extensions: 989
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -