Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G15
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.0  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 531 ILKTLKQKWKRPSKLQ 578
           ILK LKQK+ + SKL+
Sbjct: 343 ILKFLKQKYVKNSKLE 358


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 303 VHAQSTNEEVILEVYLXTDMNR 368
           VH++  N   ++  Y  TD+N+
Sbjct: 90  VHSRDVNVRAVVAQYYDTDVNK 111


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 210 MRRTI-EEKRVNTSVXRDLESVQSQATNQNTQVHAQS 317
           MRR + E+KR++ SV  D      Q  + +   H Q+
Sbjct: 788 MRRLMSEDKRLSKSVNGDQSQPPHQQLHHHQSTHPQA 824


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,853
Number of Sequences: 438
Number of extensions: 2572
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)