Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G14
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   3.8  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 145 MRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQ 243
           +R ++C  E E+    SK   N  G+K   L++
Sbjct: 331 LRKYLCKNEDETKNHYSKNTYNEQGNKLADLYK 363


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 145 MRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQ 243
           +R ++C  E E+    SK   N  G+K   L++
Sbjct: 223 LRKYLCKNEDETKNHYSKNTYNEQGNKLADLYK 255


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +1

Query: 91  TRCGLVHELRKHGFEXNLMRNWVCLVEHESSRDTS 195
           TR  L H    H      +  W+ +V  ES  DTS
Sbjct: 248 TRLFLTHRKPFHPASTQSLSRWIKMVLAESGVDTS 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 226  DYGLFQINDRYWCSKGASPXK 288
            DY     +  YW  KGA P K
Sbjct: 2538 DYFNANFSLNYWIEKGADPGK 2558


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 170 STRHTQFLMRFXSKPCFLSSCTRPHLVNVLASEPTQ 63
           S   T  L R   +  +LS+  R HL +++   PTQ
Sbjct: 48  SKAQTYELERRFRQQRYLSAPEREHLASIIRLTPTQ 83


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 400 NHCQGSLPDISSC*IP 447
           NH QGS P+I S   P
Sbjct: 77  NHIQGSKPNILSSAFP 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,865
Number of Sequences: 336
Number of extensions: 2311
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)