Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_G11
(464 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 111 2e-25
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 81 3e-16
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 81 3e-16
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 81 3e-16
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 81 4e-16
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 81 4e-16
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 62 1e-10
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 46 1e-05
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 39 0.002
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 39 0.002
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.076
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 33 0.10
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 31 0.41
X99600-1|CAA67914.1| 91|Caenorhabditis elegans ubiquitin-like ... 31 0.54
U94830-1|AAB67608.1| 91|Caenorhabditis elegans ubiquitin-like ... 31 0.54
AF043701-6|AAK18969.1| 91|Caenorhabditis elegans Sumo (ubiquit... 31 0.54
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 30 0.71
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 2.9
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 27 5.0
Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 111 bits (267), Expect = 2e-25
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
MLIKVKTLTGKEIE+DIEP D+VERIK +V EKEGIPP QQRLIF+GKQMND+KTA DYK
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 318 VQG 326
V G
Sbjct: 61 VLG 63
Score = 30.3 bits (65), Expect = 0.71
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +1
Query: 316 KFRAGSVLHLVLALRGG 366
K GSVLHLVLALRGG
Sbjct: 60 KVLGGSVLHLVLALRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV 81
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV 157
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV 233
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV 309
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV 385
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTL GK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV 461
Score = 63.7 bits (148), Expect = 6e-11
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSG 278
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+G
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV 81
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV 157
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV 233
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV 309
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV 385
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV 537
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV 613
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV 689
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 745 IQKESTLHLVLRLRGGMQIFV 765
Score = 81.0 bits (191), Expect = 4e-16
Identities = 34/62 (54%), Positives = 47/62 (75%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 318 VQ 323
+Q
Sbjct: 821 IQ 822
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTL GK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV 461
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 61 IQKESTLHLVLRLRGGMQIFV 81
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 137 IQKESTLHLVLRLRGGMQIFV 157
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 213 IQKESTLHLVLRLRGGMQIFV 233
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 289 IQKESTLHLVLRLRGGMQIFV 309
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 365 IQKESTLHLVLRLRGGMQIFV 385
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 441 IQKESTLHLVLRLRGGMQIFV 461
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 517 IQKESTLHLVLRLRGGMQIFV 537
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 593 IQKESTLHLVLRLRGGMQIFV 613
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 669 IQKESTLHLVLRLRGGMQIFV 689
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 318 VQGRFSTSSCFGFKGRRMIWL 380
+Q + +G I++
Sbjct: 745 IQKESTLHLVLRLRGGMQIFV 765
Score = 81.0 bits (191), Expect = 4e-16
Identities = 34/62 (54%), Positives = 47/62 (75%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 318 VQ 323
+Q
Sbjct: 821 IQ 822
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 81.0 bits (191), Expect = 4e-16
Identities = 34/62 (54%), Positives = 47/62 (75%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 318 VQ 323
+Q
Sbjct: 61 IQ 62
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 81.0 bits (191), Expect = 4e-16
Identities = 34/62 (54%), Positives = 47/62 (75%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
M I VKTLTGK I +++E +D +E +K ++ +KEGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 318 VQ 323
+Q
Sbjct: 61 IQ 62
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 62.5 bits (145), Expect = 1e-10
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +3
Query: 135 KMLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDY 314
K+ + VKTL GK I I I+ TD VE +K +V K G+PP QQRLIF Q+ +++ Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 315 KVQ 323
++
Sbjct: 220 NIR 222
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIP 248
M I VKTLTGK I +++E +D +E +K ++ +KEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 141 LIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQD 311
++ VKTL + + +++ + V IK ++ EGIP ++QRL ++G+Q+ D D
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDCGID 56
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 141 LIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQD 311
++ VKTL + + +++ + V IK ++ EGIP ++QRL ++G+Q+ D D
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDCGID 56
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 33.5 bits (73), Expect = 0.076
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 132 FKMLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQD 311
F++ +KV G I D V IK + + IP L FSGK++ D + D
Sbjct: 154 FQIFVKV---LGVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGD 210
Query: 312 YKVQ 323
Y +Q
Sbjct: 211 YNIQ 214
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.10
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 156 TLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTAQDYK 317
++ G+ I + VE++K ++ + GIP + L GK + D+K DYK
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADYK 202
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 31.1 bits (67), Expect = 0.41
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 141 LIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGK 281
++ VKTL + + +++ + V IK ++ EGIP ++QRL ++ +
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>X99600-1|CAA67914.1| 91|Caenorhabditis elegans ubiquitin-like
protein protein.
Length = 91
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/66 (19%), Positives = 33/66 (50%)
Frame = +3
Query: 126 NSFKMLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTA 305
N+ + IKV E+ ++ + ++K ++ G+ R +F G+++ND+ T
Sbjct: 11 NAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTP 70
Query: 306 QDYKVQ 323
+ +++
Sbjct: 71 KTLEME 76
>U94830-1|AAB67608.1| 91|Caenorhabditis elegans ubiquitin-like
protein protein.
Length = 91
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/66 (19%), Positives = 33/66 (50%)
Frame = +3
Query: 126 NSFKMLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTA 305
N+ + IKV E+ ++ + ++K ++ G+ R +F G+++ND+ T
Sbjct: 11 NAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTP 70
Query: 306 QDYKVQ 323
+ +++
Sbjct: 71 KTLEME 76
>AF043701-6|AAK18969.1| 91|Caenorhabditis elegans Sumo
(ubiquitin-related) homologprotein 1 protein.
Length = 91
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/66 (19%), Positives = 33/66 (50%)
Frame = +3
Query: 126 NSFKMLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMNDEKTA 305
N+ + IKV E+ ++ + ++K ++ G+ R +F G+++ND+ T
Sbjct: 11 NAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTP 70
Query: 306 QDYKVQ 323
+ +++
Sbjct: 71 KTLEME 76
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 30.3 bits (65), Expect = 0.71
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMND-EKTAQDY 314
ML+ +KT TGK I ++ + +K V +K+G+ +G Q+ + E T QD
Sbjct: 1 MLLSIKTSTGKNITVEAP-----KSVKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 315 KVQ 323
K+Q
Sbjct: 56 KIQ 58
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 138 MLIKVKTLTGKEIEIDIEPTDKVERIKXRVXEKEGIPPQQQRLIFSGKQMND-EKTAQDY 314
ML+ +KT TGK I ++ + +K V K+G+ +G Q+ + E T QD
Sbjct: 1 MLLSIKTSTGKTITVEAP-----KSVKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 315 KVQ 323
K+Q
Sbjct: 56 KIQ 58
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 246 PPQQQRLIFSGKQMNDEKTAQD---YKVQGRFSTSSCF 350
P +RL+FS + D+ + Y+ + STSSCF
Sbjct: 519 PTNDERLVFSSSEDEDDDDEDELRVYRPKSSTSTSSCF 556
>Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical
protein F32G8.2 protein.
Length = 520
Score = 26.6 bits (56), Expect = 8.8
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = -1
Query: 329 PALNFVILSCLLIIHL----FS*KYETLLLRRNAFLFXYSXFDSFHFVGGFYIY-FNFFT 165
P+L F ILSCLLII + Y T + + + Y+ D+ +G F + F FF
Sbjct: 13 PSLIFAILSCLLIIFIVGITHKANYNTNVGFEKKYEYAYTMQDTREQLGNFCKFPFLFFA 72
Query: 164 S 162
+
Sbjct: 73 N 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,901,766
Number of Sequences: 27780
Number of extensions: 159769
Number of successful extensions: 597
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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