Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G07
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7JNE1 Cluster: Non-histone chromosomal protein Prod; n...    36   1.1  
UniRef50_Q7JW01 Cluster: LD14312p; n=1; Drosophila melanogaster|...    34   2.6  
UniRef50_Q57UN3 Cluster: Putative uncharacterized protein; n=2; ...    33   4.5  
UniRef50_Q0B0I3 Cluster: Uncharacterized protein precursor; n=1;...    33   7.9  

>UniRef50_Q7JNE1 Cluster: Non-histone chromosomal protein Prod; n=5;
           Sophophora|Rep: Non-histone chromosomal protein Prod -
           Drosophila melanogaster (Fruit fly)
          Length = 346

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 284 NFIQMKWKELTGLLNSDSSGDPKSEDKWRK 373
           N++  KWKEL+  LN  SSG   + ++WRK
Sbjct: 42  NYLTKKWKELSDRLNKCSSGPTLTPEEWRK 71


>UniRef50_Q7JW01 Cluster: LD14312p; n=1; Drosophila
           melanogaster|Rep: LD14312p - Drosophila melanogaster
           (Fruit fly)
          Length = 239

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 299 KWKELTGLLNSDSSGDPKSEDKWRK 373
           KWKEL+ LLN  S+G   S ++WRK
Sbjct: 39  KWKELSDLLNKCSTGPTLSPEEWRK 63


>UniRef50_Q57UN3 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma|Rep: Putative uncharacterized protein -
           Trypanosoma brucei
          Length = 538

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 227 NLYSXNGDLSKPSGGPRGRNFIQMKWKELTGLLNSDSSGDPKSED 361
           N+   NGD+S   GG    N + ++W+E   L+     G+ K  D
Sbjct: 75  NVNDSNGDVSGAGGGTSSTNIVPLQWREKKFLITLSVEGEEKYVD 119


>UniRef50_Q0B0I3 Cluster: Uncharacterized protein precursor; n=1;
           Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
           Uncharacterized protein precursor - Syntrophomonas
           wolfei subsp. wolfei (strain Goettingen)
          Length = 629

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = +3

Query: 81  YLNMRTSHSQYLTTGGIYGSVSTYKVLIYXKSFXXXXXXXXXXYVMCHTIYIPXMEIYQN 260
           YLN     ++Y    G  G V+ Y  ++Y  +             +  TI IP M  +Q 
Sbjct: 123 YLNFNIKSTKY-GYNGYEGQVNVYFTMVYQTTLEQENYVNEQVAAILSTIIIPGMNEHQK 181

Query: 261 HQAVHEVAI 287
            +A+H+  +
Sbjct: 182 EKAIHDYIV 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,161,506
Number of Sequences: 1657284
Number of extensions: 7449207
Number of successful extensions: 15405
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15403
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)