Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G07
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 216 MCHTIYIPXMEIYQNHQAVHEVA 284
           +CH  Y    E+ ++ + +H++A
Sbjct: 925 ICHVCYSTIQEVSKSGELIHKIA 947


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 256 KTIRRSTRSQFYTDEVERVN 315
           KT+ RSTR   YT   + V+
Sbjct: 23  KTLHRSTRDDKYTTRYDNVD 42


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 293 QMKWKELTGLLNSDSSGDPKSEDKW 367
           Q  WKELT   + D     K +DK+
Sbjct: 93  QQMWKELTAKYDPDGIYFEKYKDKF 117


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 266 GGPRGRNFIQMKWKELTGLLNSD 334
           G  RG+N   + W+++ G +  D
Sbjct: 457 GISRGKNAKDVDWQKIAGAVEED 479


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,796
Number of Sequences: 336
Number of extensions: 2194
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)