Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G06
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07493-1|AAA58350.1|  121|Homo sapiens replication protein A 14k...    31   2.3  
DQ003136-1|AAX84517.1|  121|Homo sapiens replication protein A3,...    31   2.3  
BT007320-1|AAP35984.1|  121|Homo sapiens replication protein A3,...    31   2.3  
BC009868-1|AAH09868.1|  121|Homo sapiens replication protein A3,...    31   2.3  
BC005264-1|AAH05264.1|  121|Homo sapiens replication protein A3,...    31   2.3  
AC004948-1|AAQ96878.1|  121|Homo sapiens unknown protein.              31   2.3  

>L07493-1|AAA58350.1|  121|Homo sapiens replication protein A 14kDa
           subunit protein.
          Length = 121

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 140 VTAGNLASKNGAKVTLWGKVTXVSAXEGFYVKTVXD-QXVLIRLRKPLDEPLXXWYEIIG 316
           + AG LA      V   G++  +      ++ +  + +   I L +PLDE +    E++G
Sbjct: 12  INAGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVG 71

Query: 317 -VSQGKTVLCEDYVSLPDN 370
            V+   T+LC  YV   ++
Sbjct: 72  RVTAKATILCTSYVQFKED 90


>DQ003136-1|AAX84517.1|  121|Homo sapiens replication protein A3,
           14kDa protein.
          Length = 121

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 140 VTAGNLASKNGAKVTLWGKVTXVSAXEGFYVKTVXD-QXVLIRLRKPLDEPLXXWYEIIG 316
           + AG LA      V   G++  +      ++ +  + +   I L +PLDE +    E++G
Sbjct: 12  INAGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVG 71

Query: 317 -VSQGKTVLCEDYVSLPDN 370
            V+   T+LC  YV   ++
Sbjct: 72  RVTAKATILCTSYVQFKED 90


>BT007320-1|AAP35984.1|  121|Homo sapiens replication protein A3,
           14kDa protein.
          Length = 121

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 140 VTAGNLASKNGAKVTLWGKVTXVSAXEGFYVKTVXD-QXVLIRLRKPLDEPLXXWYEIIG 316
           + AG LA      V   G++  +      ++ +  + +   I L +PLDE +    E++G
Sbjct: 12  INAGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVG 71

Query: 317 -VSQGKTVLCEDYVSLPDN 370
            V+   T+LC  YV   ++
Sbjct: 72  RVTAKATILCTSYVQFKED 90


>BC009868-1|AAH09868.1|  121|Homo sapiens replication protein A3,
           14kDa protein.
          Length = 121

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 140 VTAGNLASKNGAKVTLWGKVTXVSAXEGFYVKTVXD-QXVLIRLRKPLDEPLXXWYEIIG 316
           + AG LA      V   G++  +      ++ +  + +   I L +PLDE +    E++G
Sbjct: 12  INAGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVG 71

Query: 317 -VSQGKTVLCEDYVSLPDN 370
            V+   T+LC  YV   ++
Sbjct: 72  RVTAKATILCTSYVQFKED 90


>BC005264-1|AAH05264.1|  121|Homo sapiens replication protein A3,
           14kDa protein.
          Length = 121

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 140 VTAGNLASKNGAKVTLWGKVTXVSAXEGFYVKTVXD-QXVLIRLRKPLDEPLXXWYEIIG 316
           + AG LA      V   G++  +      ++ +  + +   I L +PLDE +    E++G
Sbjct: 12  INAGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVG 71

Query: 317 -VSQGKTVLCEDYVSLPDN 370
            V+   T+LC  YV   ++
Sbjct: 72  RVTAKATILCTSYVQFKED 90


>AC004948-1|AAQ96878.1|  121|Homo sapiens unknown protein.
          Length = 121

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 140 VTAGNLASKNGAKVTLWGKVTXVSAXEGFYVKTVXD-QXVLIRLRKPLDEPLXXWYEIIG 316
           + AG LA      V   G++  +      ++ +  + +   I L +PLDE +    E++G
Sbjct: 12  INAGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVG 71

Query: 317 -VSQGKTVLCEDYVSLPDN 370
            V+   T+LC  YV   ++
Sbjct: 72  RVTAKATILCTSYVQFKED 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,075,427
Number of Sequences: 237096
Number of extensions: 1122428
Number of successful extensions: 1220
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)