Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G06
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X80028-1|CAA56332.1| 1126|Drosophila melanogaster dhem2 protein.       30   2.8  
AY118579-1|AAM49948.1| 1126|Drosophila melanogaster LD43495p pro...    30   2.8  
AE014296-3665|AAF51820.1| 1126|Drosophila melanogaster CG5837-PA...    30   2.8  

>X80028-1|CAA56332.1| 1126|Drosophila melanogaster dhem2 protein.
          Length = 1126

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 428 RPXITWPKLCDHQYQCLL*CCPAEKHNLR 342
           R  I +P +C H   C    CP E+H++R
Sbjct: 564 RYIIAFPLICSHFQNCTHEMCPEERHHIR 592


>AY118579-1|AAM49948.1| 1126|Drosophila melanogaster LD43495p
           protein.
          Length = 1126

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 428 RPXITWPKLCDHQYQCLL*CCPAEKHNLR 342
           R  I +P +C H   C    CP E+H++R
Sbjct: 564 RYIIAFPLICSHFQNCTHEMCPEERHHIR 592


>AE014296-3665|AAF51820.1| 1126|Drosophila melanogaster CG5837-PA
           protein.
          Length = 1126

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 428 RPXITWPKLCDHQYQCLL*CCPAEKHNLR 342
           R  I +P +C H   C    CP E+H++R
Sbjct: 564 RYIIAFPLICSHFQNCTHEMCPEERHHIR 592


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,550,633
Number of Sequences: 53049
Number of extensions: 340749
Number of successful extensions: 698
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)