Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G06
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69904-10|CAA93782.2|  754|Caenorhabditis elegans Hypothetical p...    30   1.1  
Z69902-13|CAA93770.2|  754|Caenorhabditis elegans Hypothetical p...    30   1.1  
AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical ...    29   1.9  
AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical ...    29   1.9  

>Z69904-10|CAA93782.2|  754|Caenorhabditis elegans Hypothetical
           protein ZK20.6 protein.
          Length = 754

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 219 SXAETXVTFPQSVTLAPFFEARLP-AVTYGMNSSLVG 112
           S     + FP  +   PFF+AR P A+ YG   +++G
Sbjct: 550 SPTRNAIAFPAGILQQPFFDARFPKALNYGGIGAVIG 586


>Z69902-13|CAA93770.2|  754|Caenorhabditis elegans Hypothetical
           protein ZK20.6 protein.
          Length = 754

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 219 SXAETXVTFPQSVTLAPFFEARLP-AVTYGMNSSLVG 112
           S     + FP  +   PFF+AR P A+ YG   +++G
Sbjct: 550 SPTRNAIAFPAGILQQPFFDARFPKALNYGGIGAVIG 586


>AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical
           protein F18A12.8b protein.
          Length = 816

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 219 SXAETXVTFPQSVTLAPFFEARLP-AVTYGMNSSLVG 112
           S  +  +TFP  +   PFF    P AV YG   +++G
Sbjct: 645 SPEKNAITFPAGILQPPFFSGTFPKAVNYGAIGAVIG 681


>AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical
           protein F18A12.8a protein.
          Length = 848

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 219 SXAETXVTFPQSVTLAPFFEARLP-AVTYGMNSSLVG 112
           S  +  +TFP  +   PFF    P AV YG   +++G
Sbjct: 645 SPEKNAITFPAGILQPPFFSGTFPKAVNYGAIGAVIG 681


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,118,069
Number of Sequences: 27780
Number of extensions: 189984
Number of successful extensions: 315
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)