Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G06
         (599 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   4.0  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   7.0  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   9.2  

>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 123 TNSFHTLRPVILLQK 167
           T+SFH +RP  LL K
Sbjct: 33  TSSFHEMRPDYLLPK 47


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 28  CEIYYNFTTAKVLIKKWVITTNLKT 102
           C ++   T   VLIK+ V+T N +T
Sbjct: 221 CVLFALQTPDNVLIKELVVTPNRET 245


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 329 YLVIRRLFHTIXXVAHLKVSSN 264
           +++I  LF+    + H+K+SS+
Sbjct: 56  HIIIVGLFYEFGLITHVKLSSD 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,015
Number of Sequences: 438
Number of extensions: 2315
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)