Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_G04
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 291 1e-78
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 291 1e-78
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 291 1e-78
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 291 1e-78
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 291 1e-78
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 290 3e-78
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 97 4e-20
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 97 4e-20
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 97 4e-20
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 97 4e-20
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 97 4e-20
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 97 4e-20
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 94 4e-19
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 94 4e-19
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 94 4e-19
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 94 4e-19
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 94 4e-19
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 91 3e-18
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 82 1e-15
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 82 1e-15
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 82 1e-15
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 52 1e-06
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 52 1e-06
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 52 1e-06
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 52 1e-06
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 44 5e-04
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 44 5e-04
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 44 5e-04
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 44 5e-04
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 44 5e-04
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 44 5e-04
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 44 5e-04
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 44 5e-04
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 44 5e-04
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 44 5e-04
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 44 5e-04
AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein. 36 0.095
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 31 4.7
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 31 4.7
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 31 4.7
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 31 4.7
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 31 4.7
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 31 4.7
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 31 4.7
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 291 bits (714), Expect = 1e-78
Identities = 133/187 (71%), Positives = 158/187 (84%)
Frame = +3
Query: 75 MSLWVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELY 254
MSLWVDK+RP L +LDYHKEQA +L+NLVQ DFPHLL+YGPSGAGKKTR+MC+LRELY
Sbjct: 1 MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY 60
Query: 255 GSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQ 434
G GVE+LR E TTPS KKIEI T++SNYH+EVNP+D G DRVVI +++K VAQ+ Q
Sbjct: 61 GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 120
Query: 435 IDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL 614
+++N QR+FKVV+L EVD LTKDAQHALRRTMEKY++TCRLIL NS S+VIP IRSRCL
Sbjct: 121 LETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 180
Query: 615 TISVPAP 635
+ VPAP
Sbjct: 181 AVRVPAP 187
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 291 bits (714), Expect = 1e-78
Identities = 133/187 (71%), Positives = 158/187 (84%)
Frame = +3
Query: 75 MSLWVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELY 254
MSLWVDK+RP L +LDYHKEQA +L+NLVQ DFPHLL+YGPSGAGKKTR+MC+LRELY
Sbjct: 1 MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY 60
Query: 255 GSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQ 434
G GVE+LR E TTPS KKIEI T++SNYH+EVNP+D G DRVVI +++K VAQ+ Q
Sbjct: 61 GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 120
Query: 435 IDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL 614
+++N QR+FKVV+L EVD LTKDAQHALRRTMEKY++TCRLIL NS S+VIP IRSRCL
Sbjct: 121 LETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 180
Query: 615 TISVPAP 635
+ VPAP
Sbjct: 181 AVRVPAP 187
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 291 bits (714), Expect = 1e-78
Identities = 133/187 (71%), Positives = 158/187 (84%)
Frame = +3
Query: 75 MSLWVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELY 254
MSLWVDK+RP L +LDYHKEQA +L+NLVQ DFPHLL+YGPSGAGKKTR+MC+LRELY
Sbjct: 1 MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY 60
Query: 255 GSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQ 434
G GVE+LR E TTPS KKIEI T++SNYH+EVNP+D G DRVVI +++K VAQ+ Q
Sbjct: 61 GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 120
Query: 435 IDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL 614
+++N QR+FKVV+L EVD LTKDAQHALRRTMEKY++TCRLIL NS S+VIP IRSRCL
Sbjct: 121 LETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 180
Query: 615 TISVPAP 635
+ VPAP
Sbjct: 181 AVRVPAP 187
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 291 bits (714), Expect = 1e-78
Identities = 133/187 (71%), Positives = 158/187 (84%)
Frame = +3
Query: 75 MSLWVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELY 254
MSLWVDK+RP L +LDYHKEQA +L+NLVQ DFPHLL+YGPSGAGKKTR+MC+LRELY
Sbjct: 1 MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY 60
Query: 255 GSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQ 434
G GVE+LR E TTPS KKIEI T++SNYH+EVNP+D G DRVVI +++K VAQ+ Q
Sbjct: 61 GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 120
Query: 435 IDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL 614
+++N QR+FKVV+L EVD LTKDAQHALRRTMEKY++TCRLIL NS S+VIP IRSRCL
Sbjct: 121 LETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 180
Query: 615 TISVPAP 635
+ VPAP
Sbjct: 181 AVRVPAP 187
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 291 bits (714), Expect = 1e-78
Identities = 133/187 (71%), Positives = 158/187 (84%)
Frame = +3
Query: 75 MSLWVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELY 254
MSLWVDK+RP L +LDYHKEQA +L+NLVQ DFPHLL+YGPSGAGKKTR+MC+LRELY
Sbjct: 1 MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY 60
Query: 255 GSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQ 434
G GVE+LR E TTPS KKIEI T++SNYH+EVNP+D G DRVVI +++K VAQ+ Q
Sbjct: 61 GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 120
Query: 435 IDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL 614
+++N QR+FKVV+L EVD LTKDAQHALRRTMEKY++TCRLIL NS S+VIP IRSRCL
Sbjct: 121 LETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 180
Query: 615 TISVPAP 635
+ VPAP
Sbjct: 181 AVRVPAP 187
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 290 bits (712), Expect = 3e-78
Identities = 133/187 (71%), Positives = 158/187 (84%)
Frame = +3
Query: 75 MSLWVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELY 254
MSLWVDK+RP L +LDYHKEQA +L+NLVQ DFPHLL+YGPSGAGKKTR+MC+LRELY
Sbjct: 1 MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY 60
Query: 255 GSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQ 434
G GVE+LR E TTPS KKIEI T++SNYH+EVNP+D G DRVVI +++K VAQ+ Q
Sbjct: 61 GVGVEKLRIEHQTTTTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 120
Query: 435 IDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL 614
+++N QR+FKVV+L EVD LTKDAQHALRRTMEKY++TCRLIL NS S+VIP IRSRCL
Sbjct: 121 LETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 180
Query: 615 TISVPAP 635
+ VPAP
Sbjct: 181 AVRVPAP 187
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 97.5 bits (232), Expect = 4e-20
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RPK + ++ + +E LK ++ +D P+LL YGP G GK + ++ REL+G
Sbjct: 40 WVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPE 99
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDV-GIHDRVVIMDLVKNVAQTHQID 440
+ RLR +E+N +D GI V+ + VKN AQ
Sbjct: 100 LFRLRV-----------------------LELNASDERGIQ---VVREKVKNFAQLTVSG 133
Query: 441 SNGQRE----FKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSR 608
S + FK+VIL+E D +T AQ ALRRTMEK T R LI N +SR+I + SR
Sbjct: 134 SRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSR 193
Query: 609 C 611
C
Sbjct: 194 C 194
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 97.5 bits (232), Expect = 4e-20
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RPK + ++ + +E LK ++ +D P+LL YGP G GK + ++ REL+G
Sbjct: 40 WVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPE 99
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDV-GIHDRVVIMDLVKNVAQTHQID 440
+ RLR +E+N +D GI V+ + VKN AQ
Sbjct: 100 LFRLRV-----------------------LELNASDERGIQ---VVREKVKNFAQLTVSG 133
Query: 441 SNGQRE----FKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSR 608
S + FK+VIL+E D +T AQ ALRRTMEK T R LI N +SR+I + SR
Sbjct: 134 SRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSR 193
Query: 609 C 611
C
Sbjct: 194 C 194
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 97.5 bits (232), Expect = 4e-20
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RPK + ++ + +E LK ++ +D P+LL YGP G GK + ++ REL+G
Sbjct: 40 WVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPE 99
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDV-GIHDRVVIMDLVKNVAQTHQID 440
+ RLR +E+N +D GI V+ + VKN AQ
Sbjct: 100 LFRLRV-----------------------LELNASDERGIQ---VVREKVKNFAQLTVSG 133
Query: 441 SNGQRE----FKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSR 608
S + FK+VIL+E D +T AQ ALRRTMEK T R LI N +SR+I + SR
Sbjct: 134 SRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSR 193
Query: 609 C 611
C
Sbjct: 194 C 194
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 97.5 bits (232), Expect = 4e-20
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RPK + ++ + +E LK ++ +D P+LL YGP G GK + ++ REL+G
Sbjct: 40 WVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPE 99
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDV-GIHDRVVIMDLVKNVAQTHQID 440
+ RLR +E+N +D GI V+ + VKN AQ
Sbjct: 100 LFRLRV-----------------------LELNASDERGIQ---VVREKVKNFAQLTVSG 133
Query: 441 SNGQRE----FKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSR 608
S + FK+VIL+E D +T AQ ALRRTMEK T R LI N +SR+I + SR
Sbjct: 134 SRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSR 193
Query: 609 C 611
C
Sbjct: 194 C 194
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 97.5 bits (232), Expect = 4e-20
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RPK + ++ + +E LK ++ +D P+LL YGP G GK + ++ REL+G
Sbjct: 40 WVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPE 99
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDV-GIHDRVVIMDLVKNVAQTHQID 440
+ RLR +E+N +D GI V+ + VKN AQ
Sbjct: 100 LFRLRV-----------------------LELNASDERGIQ---VVREKVKNFAQLTVSG 133
Query: 441 SNGQRE----FKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSR 608
S + FK+VIL+E D +T AQ ALRRTMEK T R LI N +SR+I + SR
Sbjct: 134 SRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSR 193
Query: 609 C 611
C
Sbjct: 194 C 194
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 97.5 bits (232), Expect = 4e-20
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RPK + ++ + +E LK ++ +D P+LL YGP G GK + ++ REL+G
Sbjct: 40 WVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPE 99
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDV-GIHDRVVIMDLVKNVAQTHQID 440
+ RLR +E+N +D GI V+ + VKN AQ
Sbjct: 100 LFRLRV-----------------------LELNASDERGIQ---VVREKVKNFAQLTVSG 133
Query: 441 SNGQRE----FKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSR 608
S + FK+VIL+E D +T AQ ALRRTMEK T R LI N +SR+I + SR
Sbjct: 134 SRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSR 193
Query: 609 C 611
C
Sbjct: 194 C 194
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 93.9 bits (223), Expect = 4e-19
Identities = 59/176 (33%), Positives = 94/176 (53%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP+ L L H++ ++ + + PHLL+YGP G GK + ++ ++LY
Sbjct: 22 WVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY--- 78
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
+K+ M +E+N +D D +I + + A T I
Sbjct: 79 --------------KDKEFGSMV------LELNASDDRGID--IIRGPILSFASTRTIFK 116
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRC 611
G FK+VIL+E D +T+DAQ+ALRR +EK+ R LI N +S++IPA++SRC
Sbjct: 117 KG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRC 169
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 93.9 bits (223), Expect = 4e-19
Identities = 59/176 (33%), Positives = 94/176 (53%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP+ L L H++ ++ + + PHLL+YGP G GK + ++ ++LY
Sbjct: 22 WVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY--- 78
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
+K+ M +E+N +D D +I + + A T I
Sbjct: 79 --------------KDKEFGSMV------LELNASDDRGID--IIRGPILSFASTRTIFK 116
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRC 611
G FK+VIL+E D +T+DAQ+ALRR +EK+ R LI N +S++IPA++SRC
Sbjct: 117 KG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRC 169
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 93.9 bits (223), Expect = 4e-19
Identities = 59/176 (33%), Positives = 94/176 (53%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP+ L L H++ ++ + + PHLL+YGP G GK + ++ ++LY
Sbjct: 22 WVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY--- 78
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
+K+ M +E+N +D D +I + + A T I
Sbjct: 79 --------------KDKEFGSMV------LELNASDDRGID--IIRGPILSFASTRTIFK 116
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRC 611
G FK+VIL+E D +T+DAQ+ALRR +EK+ R LI N +S++IPA++SRC
Sbjct: 117 KG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRC 169
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 93.9 bits (223), Expect = 4e-19
Identities = 59/176 (33%), Positives = 94/176 (53%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP+ L L H++ ++ + + PHLL+YGP G GK + ++ ++LY
Sbjct: 22 WVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY--- 78
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
+K+ M +E+N +D D +I + + A T I
Sbjct: 79 --------------KDKEFGSMV------LELNASDDRGID--IIRGPILSFASTRTIFK 116
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRC 611
G FK+VIL+E D +T+DAQ+ALRR +EK+ R LI N +S++IPA++SRC
Sbjct: 117 KG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRC 169
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 93.9 bits (223), Expect = 4e-19
Identities = 59/176 (33%), Positives = 94/176 (53%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP+ L L H++ ++ + + PHLL+YGP G GK + ++ ++LY
Sbjct: 36 WVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY--- 92
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
+K+ M +E+N +D D +I + + A T I
Sbjct: 93 --------------KDKEFGSMV------LELNASDDRGID--IIRGPILSFASTRTIFK 130
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRC 611
G FK+VIL+E D +T+DAQ+ALRR +EK+ R LI N +S++IPA++SRC
Sbjct: 131 KG---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRC 183
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 91.1 bits (216), Expect = 3e-18
Identities = 58/176 (32%), Positives = 93/176 (52%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP+ L L H++ ++ + + PHLL+YGP G GK + ++ ++LY
Sbjct: 22 WVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY--- 78
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
+K+ M +E+N +D D +I + + A T I
Sbjct: 79 --------------KDKEFGSMV------LELNASDDRGID--IIRGPILSFASTRTIFK 116
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRC 611
G FK+VIL+E D +T+DAQ+ALR +EK+ R LI N +S++IPA++SRC
Sbjct: 117 KG---FKLVILDEADAMTQDAQNALRGVIEKFTENTRFCLICNYLSKIIPALQSRC 169
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 82.2 bits (194), Expect = 1e-15
Identities = 58/179 (32%), Positives = 90/179 (50%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP L ++ +++ RL+ ++ + P+++I GP G GK T ++CL R L G
Sbjct: 38 WVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLG-- 95
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
P+ K + +SN D GI V+ + +K AQ
Sbjct: 96 -------------PALKDAMLELNASN--------DRGID---VVRNKIKMFAQQKVTLP 131
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCLTI 620
G+ K++IL+E D +T AQ ALRRTME Y T R L N+ ++I I+SRC +
Sbjct: 132 KGRH--KIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL 188
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 82.2 bits (194), Expect = 1e-15
Identities = 58/179 (32%), Positives = 90/179 (50%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP L ++ +++ RL+ ++ + P+++I GP G GK T ++CL R L G
Sbjct: 38 WVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLG-- 95
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
P+ K + +SN D GI V+ + +K AQ
Sbjct: 96 -------------PALKDAMLELNASN--------DRGID---VVRNKIKMFAQQKVTLP 131
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCLTI 620
G+ K++IL+E D +T AQ ALRRTME Y T R L N+ ++I I+SRC +
Sbjct: 132 KGRH--KIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL 188
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 82.2 bits (194), Expect = 1e-15
Identities = 58/179 (32%), Positives = 90/179 (50%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP L ++ +++ RL+ ++ + P+++I GP G GK T ++CL R L G
Sbjct: 38 WVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLG-- 95
Query: 264 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 443
P+ K + +SN D GI V+ + +K AQ
Sbjct: 96 -------------PALKDAMLELNASN--------DRGID---VVRNKIKMFAQQKVTLP 131
Query: 444 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCLTI 620
G+ K++IL+E D +T AQ ALRRTME Y T R L N+ ++I I+SRC +
Sbjct: 132 KGRH--KIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL 188
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP L ++ +++ RL+ ++ + P+++I GP G GK T ++CL R L G
Sbjct: 38 WVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPA 97
Query: 264 VE 269
++
Sbjct: 98 LK 99
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 486 DDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCLTI 620
D +T AQ ALRRTME Y T R L N+ ++I I+SRC +
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL 154
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP L ++ +++ RL+ ++ + P+++I GP G GK T ++CL R L G
Sbjct: 38 WVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPA 97
Query: 264 VE 269
++
Sbjct: 98 LK 99
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 486 DDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCLTI 620
D +T AQ ALRRTME Y T R L N+ ++I I+SRC +
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL 154
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP L ++ +++ RL+ ++ + P+++I GP G GK T ++CL R L G
Sbjct: 38 WVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPA 97
Query: 264 VE 269
++
Sbjct: 98 LK 99
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 486 DDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCLTI 620
D +T AQ ALRRTME Y T R L N+ ++I I+SRC +
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL 154
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 263
WV+K+RP L ++ +++ RL+ ++ + P+++I GP G GK T ++CL R L G
Sbjct: 38 WVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPA 97
Query: 264 VE 269
++
Sbjct: 98 LK 99
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 486 DDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCLTI 620
D +T AQ ALRRTME Y T R L N+ ++I I+SRC +
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL 154
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 91 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 150
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 151 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMLPYQSQIAVFKEFLLRATK 205
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 206 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 263
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Frame = +3
Query: 84 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPH--------LLIYGPSGAGKKTRVMCL 239
WVDK++P+ +L HK++ ++ ++ LLI GP G GK T + L
Sbjct: 80 WVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKIL 139
Query: 240 LRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIEVNPTDVGIHDRVVIMDLV 410
+E +G V QE +N P +K + + S++H+ + + + ++
Sbjct: 140 SKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQISVFKEFLLRATK 194
Query: 411 KNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYV--ATCRLI-LIANSIS 581
N Q + + + + K++++ ++ + H L + KYV C LI +I++S+S
Sbjct: 195 YNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLS 252
>AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein.
Length = 584
Score = 36.3 bits (80), Expect = 0.095
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Frame = +3
Query: 186 LLIYGPSGAGKKTRVMCLLRELYGSGVERLRQETMNFTTPSNKKIE---IMTVSSNYHIE 356
LLI GP G GK T + L +E +G V QE +N P +K + + S++H+
Sbjct: 36 LLITGPPGCGKTTTLKILSKE-HGIQV----QEWINPVLPDFQKDDFKGMFNTESSFHMF 90
Query: 357 VNPTDVGIHDRVVIMDLVKNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEK 536
+ + + ++ N Q + + + + K++++ ++ + H L + K
Sbjct: 91 PYQSQIAVFKEFLLRATKYNKLQ--MLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLRK 148
Query: 537 YV--ATCRLI-LIANSIS 581
YV C LI +I++S+S
Sbjct: 149 YVRIGRCPLIFIISDSLS 166
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 138 QAVRLKNLVQQSDFPHLLIYGPSGAGKKT 224
Q L++L++ ++ P L+++GP G GK T
Sbjct: 248 QDTLLRSLLETNEIPSLILWGPPGCGKTT 276
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 138 QAVRLKNLVQQSDFPHLLIYGPSGAGKKT 224
Q L++L++ ++ P L+++GP G GK T
Sbjct: 28 QDTLLRSLLETNEIPSLILWGPPGCGKTT 56
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 138 QAVRLKNLVQQSDFPHLLIYGPSGAGKKT 224
Q L++L++ ++ P L+++GP G GK T
Sbjct: 248 QDTLLRSLLETNEIPSLILWGPPGCGKTT 276
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 138 QAVRLKNLVQQSDFPHLLIYGPSGAGKKT 224
Q L++L++ ++ P L+++GP G GK T
Sbjct: 248 QDTLLRSLLETNEIPSLILWGPPGCGKTT 276
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 138 QAVRLKNLVQQSDFPHLLIYGPSGAGKKT 224
Q L++L++ ++ P L+++GP G GK T
Sbjct: 248 QDTLLRSLLETNEIPSLILWGPPGCGKTT 276
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 138 QAVRLKNLVQQSDFPHLLIYGPSGAGKKT 224
Q L++L++ ++ P L+++GP G GK T
Sbjct: 28 QDTLLRSLLETNEIPSLILWGPPGCGKTT 56
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 138 QAVRLKNLVQQSDFPHLLIYGPSGAGKKT 224
Q L++L++ ++ P L+++GP G GK T
Sbjct: 229 QDTLLRSLLETNEIPSLILWGPPGCGKTT 257
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,021,649
Number of Sequences: 237096
Number of extensions: 1662364
Number of successful extensions: 3185
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 3026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3162
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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