Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G03
         (651 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q60RF4 Cluster: Putative uncharacterized protein CBG213...    33   5.9  
UniRef50_Q17KI3 Cluster: Serine protease; n=2; Endopterygota|Rep...    33   5.9  
UniRef50_Q4DPP1 Cluster: Putative uncharacterized protein; n=2; ...    33   7.8  
UniRef50_Q22TC8 Cluster: Variant-specific surface protein S2, pu...    33   7.8  
UniRef50_Q1JTE7 Cluster: Putative uncharacterized protein precur...    33   7.8  
UniRef50_Q6CET1 Cluster: Similarities with tr|Q8X1W6 Aspergillus...    33   7.8  

>UniRef50_Q60RF4 Cluster: Putative uncharacterized protein CBG21364;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG21364 - Caenorhabditis
           briggsae
          Length = 1011

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -3

Query: 484 GFSSELPPTGPGFGSNPIASGTX*PLEFNTPNA 386
           G S   PP GP  GS P   GT  P+ F TP +
Sbjct: 22  GSSGSRPPGGPPGGSKPPPGGTYPPVRFTTPGS 54


>UniRef50_Q17KI3 Cluster: Serine protease; n=2; Endopterygota|Rep:
           Serine protease - Aedes aegypti (Yellowfever mosquito)
          Length = 1243

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 490 RAGFSSELPPTG-PGFGSNPIASGTX*PLEFNTPN 389
           + GFSS+ PP G P     PI  G+  P EF  PN
Sbjct: 190 KVGFSSQQPPYGGPNSFQGPIYEGSDIPYEFENPN 224


>UniRef50_Q4DPP1 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 868

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 139 YSIRAMGCSGHWKEAPESMEQSK 71
           Y +RA GC+G WKEA E +++ K
Sbjct: 618 YCLRAFGCAGKWKEAMELLKRLK 640


>UniRef50_Q22TC8 Cluster: Variant-specific surface protein S2,
           putative; n=3; Tetrahymena thermophila SB210|Rep:
           Variant-specific surface protein S2, putative -
           Tetrahymena thermophila SB210
          Length = 582

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 400 NTPNAFKGFERRCGSCSDEIPLLSPKASDRSFNPRSSS 287
           N PN  + FE  C +C+D   L S K  ++ F+P   S
Sbjct: 9   NDPNCIRCFESGCSACADNYFLNSSKQCEKCFDPNCVS 46


>UniRef50_Q1JTE7 Cluster: Putative uncharacterized protein
           precursor; n=1; Toxoplasma gondii RH|Rep: Putative
           uncharacterized protein precursor - Toxoplasma gondii RH
          Length = 651

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -3

Query: 469 LPPTGPGFGSNPIASGTX*PL--EFNTPNAFKGFERRCGSCSDEIPLLSPKASDRSFNPR 296
           LPPT P   S+P  S    P+   F++P++         S S   P  SP +S    +P 
Sbjct: 286 LPPTPPSPSSSPSGSSDSLPIASTFSSPSSSSSSSSSSPSPSSS-PSSSPSSSSSPSSPS 344

Query: 295 SSSEP 281
           SSS P
Sbjct: 345 SSSSP 349


>UniRef50_Q6CET1 Cluster: Similarities with tr|Q8X1W6 Aspergillus
           oryzae Putative transcriptional activator; n=1; Yarrowia
           lipolytica|Rep: Similarities with tr|Q8X1W6 Aspergillus
           oryzae Putative transcriptional activator - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 639

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 21/58 (36%), Positives = 26/58 (44%)
 Frame = -3

Query: 403 FNTPNAFKGFERRCGSCSDEIPLLSPKASDRSFNPRSSSEPLALVRPGISPA*SADWP 230
           F T N FK  +  CG C+D  P L   A+  S      S  L  +   +SPA SA  P
Sbjct: 411 FKTRNPFKKRKDSCGFCTDGTPCLCEDAAAESVAESKKSLKLPPLGMPLSPAASAASP 468


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,635,128
Number of Sequences: 1657284
Number of extensions: 12537604
Number of successful extensions: 28896
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28892
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)