Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G03
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.8  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 172 PKVYSVYPAACYS 134
           P   S YP ACYS
Sbjct: 32  PNANSTYPPACYS 44


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 172 PKVYSVYPAACYS 134
           P   S YP ACYS
Sbjct: 32  PNANSTYPPACYS 44


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 172 PKVYSVYPAACYS 134
           P   S YP ACYS
Sbjct: 32  PNANSTYPPACYS 44


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 172 PKVYSVYPAACYS 134
           P   S YP ACYS
Sbjct: 32  PNANSTYPPACYS 44


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 172 PKVYSVYPAACYS 134
           P   S YP ACYS
Sbjct: 32  PNANSTYPPACYS 44


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 172 PKVYSVYPAACYS 134
           P   S YP ACYS
Sbjct: 32  PNANSTYPPACYS 44


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 172 PKVYSVYPAACYS 134
           P   S YP ACYS
Sbjct: 32  PNANSTYPPACYS 44


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 172 PKVYSVYPAACYS 134
           P   S YP ACYS
Sbjct: 32  PNANSTYPPACYS 44


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 331 SPKASDRSFNPRSSS 287
           SP +SDRS  PRS++
Sbjct: 936 SPASSDRSGTPRSTN 950


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 399 IHPMHLKASREDVGLAAMRSRC*VPKLPTDH 307
           +H  H + +     L+AM +RC    L +DH
Sbjct: 313 MHQQHHQQNMSHEELSAMVNRCHPLSLSSDH 343


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/18 (44%), Positives = 12/18 (66%), Gaps = 3/18 (16%)
 Frame = +1

Query: 166 PLGI---LGRQTCQWSSK 210
           P+G+   + RQTC W +K
Sbjct: 75  PVGLAFDIERQTCDWKTK 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,626
Number of Sequences: 336
Number of extensions: 3084
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)