Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G03
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    27   0.68 
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   6.3  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   6.3  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.4  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   8.4  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 24  GVHTADIVGDYRRNLCLLCSIDSGASFQCPEQP 122
           G  TAD  G+ R +LCL C      +  C   P
Sbjct: 298 GHTTADCAGEDRSSLCLHCGAADHRAASCTSDP 330


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 468 SSDEKPALGLIDH 506
           SSDEKP L L DH
Sbjct: 72  SSDEKPTLWLKDH 84


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 51  DYRRNLCLLCSIDSGASFQCPEQP 122
           D R+N+C+ C +    +  C  QP
Sbjct: 679 DDRQNMCIRCGVVGHMAKVCTSQP 702


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 476 IGASTNRSRFWFQSYCV 426
           +G++  RS +W Q YC+
Sbjct: 409 VGSTGYRSSWWTQFYCI 425


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 476 IGASTNRSRFWFQSYCV 426
           +G++  RS +W Q YC+
Sbjct: 409 VGSTGYRSSWWTQFYCI 425


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 476 IGASTNRSRFWFQSYCV 426
           +G++  RS +W Q YC+
Sbjct: 387 VGSTGYRSSWWTQFYCI 403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,454
Number of Sequences: 2352
Number of extensions: 14112
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)