Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G03
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051450-1|AAK92874.1|  317|Drosophila melanogaster GH11727p pro...    28   9.6  
AM262816-1|CAK18656.1|  317|Drosophila melanogaster growth arres...    28   9.6  
AE013599-3761|AAF47124.1|  317|Drosophila melanogaster CG3825-PA...    28   9.6  

>AY051450-1|AAK92874.1|  317|Drosophila melanogaster GH11727p
           protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -3

Query: 172 PKVYSVYPAACYSIRAMGCSGHWKEAPESMEQSKQRLRR*SPTISAV*TP 23
           P+V+ V  A  Y+ RA   S  W+      ++ +QR+RR SP ++AV TP
Sbjct: 255 PEVH-VMLAWDYAYRAARKS-EWQVMARDRDRFQQRIRRISPILNAVLTP 302


>AM262816-1|CAK18656.1|  317|Drosophila melanogaster growth arrest
           and DNA damage 34homologue protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -3

Query: 172 PKVYSVYPAACYSIRAMGCSGHWKEAPESMEQSKQRLRR*SPTISAV*TP 23
           P+V+ V  A  Y+ RA   S  W+      ++ +QR+RR SP ++AV TP
Sbjct: 255 PEVH-VMLAWDYAYRAARKS-EWQVMARDRDRFQQRIRRISPILNAVLTP 302


>AE013599-3761|AAF47124.1|  317|Drosophila melanogaster CG3825-PA
           protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -3

Query: 172 PKVYSVYPAACYSIRAMGCSGHWKEAPESMEQSKQRLRR*SPTISAV*TP 23
           P+V+ V  A  Y+ RA   S  W+      ++ +QR+RR SP ++AV TP
Sbjct: 255 PEVH-VMLAWDYAYRAARKS-EWQVMARDRDRFQQRIRRISPILNAVLTP 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,532,548
Number of Sequences: 53049
Number of extensions: 585483
Number of successful extensions: 1369
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)