Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_G02
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0484 + 8805053-8805538 40 0.001
03_02_0483 - 8804021-8804485 40 0.001
03_02_0485 - 8808139-8808618 39 0.002
03_02_0478 + 8775892-8776377 39 0.002
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.021
01_01_0229 - 1943473-1943922 36 0.028
01_01_0231 + 1951047-1951499 35 0.038
01_01_0227 + 1933247-1933699 35 0.050
02_05_0494 + 29486960-29487454 32 0.26
02_02_0077 - 6586638-6587165 32 0.35
02_05_0972 + 33198035-33198277,33198366-33198641 30 1.1
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 30 1.4
07_01_1032 - 8947594-8947769,8947885-8948601,8948973-8949049,894... 27 7.5
04_03_0869 + 20421368-20421548,20421781-20422664,20422747-204229... 27 7.5
12_01_0559 + 4527769-4527924,4528038-4528129,4528799-4528905,452... 27 10.0
09_06_0319 - 22293869-22293906,22294539-22295808 27 10.0
04_03_0870 + 20431215-20431419,20432559-20433439,20433829-204339... 27 10.0
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702... 27 10.0
>03_02_0484 + 8805053-8805538
Length = 161
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +1
Query: 322 DVQHFAPEXISVKTADGYIV-VEG---KHXEXKXEHGY----ISRQFVRRYALPEGAAPE 477
DV E + V+ DG ++ + G K E K + + S +F+RR+ LPE PE
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 478 TVESRLSSDGVLTITAPXKVP 540
+++ + +GVLT+T P + P
Sbjct: 130 QIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +1
Query: 322 DVQHFAPEXISVKTADGYIV-VEG---KHXEXKXEHGY----ISRQFVRRYALPEGAAPE 477
DV E + V+ DG ++ + G K E K + + S +F+RR+ LPE PE
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 478 TVESRLSSDGVLTITAPXKVP 540
+++ + +GVLT+T P + P
Sbjct: 123 QIKASM-ENGVLTVTVPKEEP 142
>03_02_0485 - 8808139-8808618
Length = 159
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Frame = +1
Query: 322 DVQHFAPEXISVKTADGYIV-VEGKHXEXKXEHG-------YISRQFVRRYALPEGAAPE 477
DV E + V+ DG I+ + G+ + E S +F+RR+ LPE PE
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 478 TVESRLSSDGVLTITAPXKVP 540
+++ + +GVLT+T P + P
Sbjct: 128 QIKASM-ENGVLTVTVPKEEP 147
>03_02_0478 + 8775892-8776377
Length = 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Frame = +1
Query: 322 DVQHFAPEXISVKTADGYIV-VEG---KHXEXKXEHGY----ISRQFVRRYALPEGAAPE 477
DV E + V+ DG I+ + G K E K + + S +F+RR+ LP+ A PE
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 478 TVESRLSSDGVLTITAP 528
+++ + +GVLT+T P
Sbjct: 130 QIKASM-ENGVLTVTVP 145
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.9 bits (79), Expect = 0.021
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 322 DVQHFAPEXISVKTADGYIVV----EGKHXEXKXEHGY----ISRQFVRRYALPEGAAPE 477
D+ E + V+ +G ++V K E K + + S QF+RR+ LPE A +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 478 TVESRLSSDGVLTITAP 528
V++ L +GVLT+T P
Sbjct: 119 QVKAGL-ENGVLTVTVP 134
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.5 bits (78), Expect = 0.028
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 322 DVQHFAPEXISVKTADGYIVV----EGKHXEXKXEHGY----ISRQFVRRYALPEGAAPE 477
D+ E + V+ +G ++V K E K + + S QF+RR+ LPE A +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 478 TVESRLSSDGVLTITAP 528
V++ + +GVLT+T P
Sbjct: 118 QVKASM-ENGVLTVTVP 133
>01_01_0231 + 1951047-1951499
Length = 150
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = +1
Query: 322 DVQHFAPEXISVKTADGYIVV----EGKHXEXKXEHGY----ISRQFVRRYALPEGAAPE 477
D+ E + V+ +G ++V K E K + + S QF+RR+ LPE A +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 478 TVESRLSSDGVLTITAP 528
V++ + +GVLT+T P
Sbjct: 119 QVKAGM-ENGVLTVTVP 134
>01_01_0227 + 1933247-1933699
Length = 150
Score = 34.7 bits (76), Expect = 0.050
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 382 VEGKHXEXKXEHGYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAP 528
V+GK+ E S +F RR+ LP GA + V + + +GVLT+T P
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVP 134
>02_05_0494 + 29486960-29487454
Length = 164
Score = 32.3 bits (70), Expect = 0.26
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 430 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPXK 534
R V ++ LPE AA + +R++ DGVLT+T P +
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>02_02_0077 - 6586638-6587165
Length = 175
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 433 QFVRRYALPEGAAPETVESRLSSDGVLTITAPXKVP 540
+F+RR+ LPE A + V + DGVLT+T K P
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPP 151
>02_05_0972 + 33198035-33198277,33198366-33198641
Length = 172
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 385 EGKHXEXKXEHGYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPXKVP 540
EG+ + E R F R++ LPE A + +R +GVLT+T + P
Sbjct: 109 EGECKYIRLERRASPRAFARKFRLPEDADTGGISAR-CENGVLTVTVKKRPP 159
>02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 23 QRENTNIQTLYPSDFPGVIFNKKQEC--RCYHISS 121
+ EN NI+ L D P VIF +++C C+ I+S
Sbjct: 1134 EEENLNIEQLQKKDSPDVIFLGEKQCPDNCFDITS 1168
>07_01_1032 -
8947594-8947769,8947885-8948601,8948973-8949049,
8949264-8949655,8949746-8950002,8950234-8950921
Length = 768
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 187 DDLLSVAAGPLLNREYYRPWR-HLAAAARDVGSSIKVDKDKFQVN-LDVQHFAPEXISVK 360
D + +A+G + R Y + H + G +K + +F N + +Q F E ISV
Sbjct: 376 DHDMVIASGRKICRWLYNHSKLHSMMVSAIGGELVKWNATRFGTNCMFLQSFLKEAISVH 435
Query: 361 TADGYIVVEGK 393
DG++ + K
Sbjct: 436 AVDGFLYIHAK 446
>04_03_0869 +
20421368-20421548,20421781-20422664,20422747-20422905,
20423008-20423252,20423360-20423453,20423580-20423768
Length = 583
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/42 (23%), Positives = 25/42 (59%)
Frame = -3
Query: 126 IIEEIW*QRHSCFLLKITPGKSLGYNVCMFVFSRCGSEIRTS 1
++E + +C L ++ P K++G + +FVF+ S+++ +
Sbjct: 526 VVESFGARGKTCILTRVYPRKAVGDDAHLFVFNNGESDVKVT 567
>12_01_0559 +
4527769-4527924,4528038-4528129,4528799-4528905,
4528987-4529042,4529196-4529346,4530223-4530528,
4530753-4531597
Length = 570
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 257 ARWRHGL*YSLFSKGPAATLRRSSGVKAR 171
A WRH + LFS PAA LRR + ++R
Sbjct: 32 AEWRH-VRDGLFSASPAAALRRIAAWRSR 59
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 88 KARMSLLPYFFDDFGSRRP--RRLLDQHFGLALTPDDLLSVAA 210
K LLP FDD G+ +P RL H L+L DD++ A
Sbjct: 329 KMNFELLPKLFDDQGTPQPTLERLHVGHPTLSLHSDDIVCFMA 371
>04_03_0870 +
20431215-20431419,20432559-20433439,20433829-20433990,
20434742-20435001,20435110-20435200,20435487-20435675
Length = 595
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 96 SCFLLKITPGKSLGYNVCMFVFSRCGSEIRTS 1
+C L ++ P ++G N ++VF+ +EI+ S
Sbjct: 548 ACILSRVYPSLAIGKNARLYVFNNGKAEIKVS 579
>02_05_0235 -
27068516-27069032,27069697-27069788,27070056-27070289,
27071569-27071676,27071796-27071855,27072368-27072443,
27072550-27072710,27076919-27076981,27077061-27077148,
27077568-27078308,27078406-27079033,27079314-27079368,
27082073-27083527
Length = 1425
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 233 YSLFSKGPAATLRRSSGVKARPKCWSNRRRGRLEPKSSKKY 111
YS++S G T+ ++ RP+ W + + EP S K+
Sbjct: 387 YSIYSAGRMKTVWGEDCLEFRPERWLSADGSKFEPHDSYKF 427
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,893,093
Number of Sequences: 37544
Number of extensions: 299397
Number of successful extensions: 753
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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