Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G01
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.74 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.9  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   6.9  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   6.9  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   6.9  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   6.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.1  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 240 LVYFRNMINEGVTYXILNLYENTFPTLTEKYFENTP 347
           LVY  +  NEG    I N  +N+F  LT   F + P
Sbjct: 200 LVYIGD--NEGFALIIYNNSDNSFQRLTSSTFASDP 233


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 407 YTKNYTTVTSMQEXLXDQN 463
           Y KNYT   S ++ L  QN
Sbjct: 446 YNKNYTKFCSTEKRLTKQN 464


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +1

Query: 457 PKPEQRFHSFYNYCDLFNYILSVTPVPLELP 549
           P+P   F S       F YI   TP P  +P
Sbjct: 126 PRPMGPFVSMQEQIPRFRYIGPPTPFPRFIP 156


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +1

Query: 457 PKPEQRFHSFYNYCDLFNYILSVTPVPLELP 549
           P+P   F S       F YI   TP P  +P
Sbjct: 126 PRPMGPFVSMQEQIPRFRYIGPPTPFPRFIP 156


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +1

Query: 457 PKPEQRFHSFYNYCDLFNYILSVTPVPLELP 549
           P+P   F S       F YI   TP P  +P
Sbjct: 126 PRPMGPFVSMQEQIPRFRYIGPPTPFPRFIP 156


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +1

Query: 457 PKPEQRFHSFYNYCDLFNYILSVTPVPLELP 549
           P+P   F S       F YI   TP P  +P
Sbjct: 126 PRPMGPFVSMQEQIPRFRYIGPPTPFPRFIP 156


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 108 YSSDDYNEGGYESYG 152
           Y S  Y+EG Y  YG
Sbjct: 140 YVSTVYSEGSYGEYG 154


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +3

Query: 141 ESYGDYEAQSTEHYXPEYDRSSYYKMP 221
           E Y  Y A +      E+D  S+Y  P
Sbjct: 771 EHYALYTAMAPHATASEFDEMSFYYSP 797


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 108 YSSDDYNEGGYESYG 152
           Y S  Y+EG Y  YG
Sbjct: 230 YVSTVYSEGSYGEYG 244


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,838
Number of Sequences: 438
Number of extensions: 3303
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)