Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_G01
         (595 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g25757.1 68418.m03055 expressed protein                             89   2e-18
At5g25754.1 68418.m03054 expressed protein                             89   2e-18
At5g16500.1 68418.m01928 protein kinase family protein contains ...    28   5.4  

>At5g25757.1 68418.m03055 expressed protein
          Length = 514

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 38/81 (46%), Positives = 57/81 (70%)
 Frame = +1

Query: 352 PDEXEVSPIVDNDNVFMILYKELYYRDIYARVPXGPKPEQRFHSFYNYCDLFNYILSVTP 531
           P    ++P VDND+VF +LY+E+++R +YAR+   P  +QR  S+ NYC LF  +L    
Sbjct: 68  PSVEAIAPYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSYDNYCSLFQVVLHGV- 124

Query: 532 VPLELPDQWLWELIDEFVYXF 594
           V ++LP+QWLW+++DEFVY F
Sbjct: 125 VNMQLPNQWLWDMVDEFVYQF 145


>At5g25754.1 68418.m03054 expressed protein
          Length = 514

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 38/81 (46%), Positives = 57/81 (70%)
 Frame = +1

Query: 352 PDEXEVSPIVDNDNVFMILYKELYYRDIYARVPXGPKPEQRFHSFYNYCDLFNYILSVTP 531
           P    ++P VDND+VF +LY+E+++R +YAR+   P  +QR  S+ NYC LF  +L    
Sbjct: 68  PSVEAIAPYVDNDHVFCLLYREMWFRHLYARL--SPTLKQRIDSYDNYCSLFQVVLHGV- 124

Query: 532 VPLELPDQWLWELIDEFVYXF 594
           V ++LP+QWLW+++DEFVY F
Sbjct: 125 VNMQLPNQWLWDMVDEFVYQF 145


>At5g16500.1 68418.m01928 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 636

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 102 TMYSSDDYNEGGYESYGDYEAQSTEHYXPEYD 197
           ++YS DD  E G  S    EA+  EH   ++D
Sbjct: 605 SVYSDDDAGESGESSLHRIEAKEEEHISSDHD 636


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,146,359
Number of Sequences: 28952
Number of extensions: 211863
Number of successful extensions: 490
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)