Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F24
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 223 7e-59
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 223 1e-58
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 184 6e-47
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 2e-43
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 104 5e-23
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 85 6e-17
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_34478| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.3
SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13) 28 5.8
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 223 bits (546), Expect = 7e-59
Identities = 104/137 (75%), Positives = 119/137 (86%)
Frame = +1
Query: 241 YVAFTDTERLIGXAAXXQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 420
YV FTDTERL+G AA QVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD K
Sbjct: 41 YVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNK 100
Query: 421 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETXEAYLGKTVQNAVXXVPAYFNDSQRQATKD 600
PKI+V YKGE KTF EE+SSMVL KMKET EAYLG+ V +AV VPAYFNDSQRQATKD
Sbjct: 101 PKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKD 160
Query: 601 AGTISGLNVLRIINEPT 651
AGTI+GLNVLR+INEPT
Sbjct: 161 AGTIAGLNVLRVINEPT 177
Score = 70.9 bits (166), Expect = 8e-13
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +3
Query: 120 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 227
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQG +
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNR 36
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 223 bits (544), Expect = 1e-58
Identities = 104/137 (75%), Positives = 117/137 (85%)
Frame = +1
Query: 241 YVAFTDTERLIGXAAXXQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 420
YVAF+DTERLIG AA QVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +
Sbjct: 41 YVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGER 100
Query: 421 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETXEAYLGKTVQNAVXXVPAYFNDSQRQATKD 600
PKI+V +KGE K+FFPEE+SSMVLTKMKET EAYLG V +AV VPAYF+DSQRQATKD
Sbjct: 101 PKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKD 160
Query: 601 AGTISGLNVLRIINEPT 651
AGTI+GLNVLRIINEPT
Sbjct: 161 AGTIAGLNVLRIINEPT 177
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3
Query: 120 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 227
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQG +
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNR 36
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 184 bits (448), Expect = 6e-47
Identities = 90/138 (65%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
Frame = +1
Query: 241 YVAFTDT-ERLIGXAAXXQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG 417
YVAFT+ ERLIG A Q+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV
Sbjct: 738 YVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNK 797
Query: 418 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETXEAYLGKTVQNAVXXVPAYFNDSQRQATK 597
KP ++V K E KTF EE+S+MVLTKMKET EAYLGK V +AV VPAYFND+QRQATK
Sbjct: 798 KPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Query: 598 DAGTISGLNVLRIINEPT 651
DAG I+GL V+RIINEPT
Sbjct: 858 DAGAIAGLTVMRIINEPT 875
Score = 58.0 bits (134), Expect = 6e-09
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = +3
Query: 138 VGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 227
+GIDLGTTYSCVGVF++G+VEIIANDQG +
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNR 733
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 172 bits (419), Expect = 2e-43
Identities = 93/147 (63%), Positives = 102/147 (69%), Gaps = 25/147 (17%)
Frame = +1
Query: 241 YVAFTDTERLIGXAAXXQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 420
YVAFTD ERL+G AA QVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+
Sbjct: 41 YVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGR 100
Query: 421 PKIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMKETXEAYL 525
PK+KV YKGE KTFF EEV SSMVL KMKET EAYL
Sbjct: 101 PKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYL 160
Query: 526 GKTVQNAVXXVPAYFNDSQRQATKDAG 606
G V +AV VPAYFNDSQRQATKDAG
Sbjct: 161 GCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 101 bits (241), Expect = 7e-22
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +1
Query: 472 EVSSMVLTKMKETXEAYLGKTVQNAVXXVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 651
++SSMVL KMKET EAYLG V +AV VPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +3
Query: 120 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 227
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQG +
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNR 36
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 104 bits (250), Expect = 5e-23
Identities = 58/137 (42%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Frame = +1
Query: 244 VAFTDTERLIGXAAXXQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GK 420
VAFTD L+G A Q +NP NTI+DAKR IG+ F + K + F V +D G
Sbjct: 71 VAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGN 130
Query: 421 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETXEAYLGKTVQNAVXXVPAYFNDSQRQATKD 600
V KG PEE+ V+ K++ E L TV AV VPA F+ QR AT
Sbjct: 131 AGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVK 190
Query: 601 AGTISGLNVLRIINEPT 651
A +++G+ VLR+INEPT
Sbjct: 191 AASLAGITVLRVINEPT 207
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Frame = +3
Query: 126 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIAND 215
K +GIDLGTTYSCVG +Q G+++I +++
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDE 61
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 97.5 bits (232), Expect = 8e-21
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = +1
Query: 304 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 480
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 481 SMVLTKMKETXEAYLGKTVQNAVXXVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 651
+M+ T++K T E L V + V VP+Y+ D QR+ DA +GLN LR++N+ T
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTT 234
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 84.6 bits (200), Expect = 6e-17
Identities = 39/68 (57%), Positives = 54/68 (79%)
Frame = +1
Query: 427 IKVAYKGEDKTFFPEEVSSMVLTKMKETXEAYLGKTVQNAVXXVPAYFNDSQRQATKDAG 606
I V GE ++F PE++S++VL ++K EA+LG+ V+ AV VPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 607 TISGLNVL 630
TI+GL+VL
Sbjct: 62 TIAGLDVL 69
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = +1
Query: 421 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETXEAYLGKTVQNAVXXVPAYFNDSQRQATKD 600
P +K Y+ D TF PEE+ M+L + E + +++ V VP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 601 AGTISGLNVLRIINEPT 651
A + GLNVL+I+N T
Sbjct: 127 AAELVGLNVLQIMNSNT 143
>SB_34478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 14/65 (21%)
Frame = +3
Query: 246 CVHRHRASHRXCRQXPGGDEP----QQ----------HNIRCQTSHRT*VRRCYCASRHE 383
C R R S C++ PG D+P QQ H++RC+ HR VRR Y RH
Sbjct: 9 CSSRRR-SQLVCKRMPGADKPVRARQQFFAEQIVLRVHHMRCEIPHRC-VRRKYRIRRHS 66
Query: 384 ALAFR 398
R
Sbjct: 67 PFRLR 71
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 325 RILCCWGSSPPGXWRH 278
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 325 RILCCWGSSPPGXWRH 278
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13)
Length = 822
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 494 VSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMS-ACTVASSNLRPMRRLASNI 318
VST+++T G +L+ T LG+ + T S S T+ S +L PMRR +
Sbjct: 751 VSTVDVTLDGLYILAGT--TTGNLGVLNASTRSYTTLMRSHTSTITSMDLDPMRRHMGTV 808
Query: 317 VLLGFIATWXL 285
G I W L
Sbjct: 809 SADGTIRIWDL 819
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 515 SXVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 336
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 335 RLASNIVL 312
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1830
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +3
Query: 216 QGQQDHSVLCCVH--RHRASHRXCRQXPGGDEPQQHNI-RCQTSHR 344
Q + H V C R RASHR C + P P++H + R + +H+
Sbjct: 793 QQTKRHFVSCSRRWPRGRASHRACARAPKMPPPERHALTRLRHTHQ 838
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,609,762
Number of Sequences: 59808
Number of extensions: 394049
Number of successful extensions: 876
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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