Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_F21
         (488 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    43   0.004
UniRef50_UPI0000DA1953 Cluster: PREDICTED: hypothetical protein;...    33   2.6  
UniRef50_Q2HHY2 Cluster: Putative uncharacterized protein; n=3; ...    33   2.6  
UniRef50_Q4SF20 Cluster: Chromosome 1 SCAF14609, whole genome sh...    33   3.4  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   3.4  
UniRef50_Q74FK1 Cluster: Selenide, water dikinase; n=10; Bacteri...    32   6.0  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 42.7 bits (96), Expect = 0.004
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = -2

Query: 307 KPRASASKLTHRHSPLSFSPDLLSGSRFRSGGRF 206
           K    +++  HR  PLSFSPDLLSGSRFR+G  +
Sbjct: 382 KTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415


>UniRef50_UPI0000DA1953 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 156

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 352 IGAFRYRKHWSPFLSKPRASASKLTHRHSPLSFSPDLLSG 233
           +G  R+R H SP  ++P    S   HRH+ L  +P LL+G
Sbjct: 63  LGDTRWRTHLSPAAAQPLRRGSTPAHRHAELVPAPYLLTG 102


>UniRef50_Q2HHY2 Cluster: Putative uncharacterized protein; n=3;
           Eukaryota|Rep: Putative uncharacterized protein -
           Chaetomium globosum (Soil fungus)
          Length = 772

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -1

Query: 422 QISSFQNFTLWASTASFRILLIHYRCF*VPQALVTVLVETSSLGE*INPQTQPTEFLAGS 243
           +I +F  F +WA    FR++ I +R +    A VTVL +T   GE +    +  +   G 
Sbjct: 468 EIWAFVAFGIWACDRLFRLVRIAFRGY--RTATVTVLQDTD--GEYLRIDIENAQLGEGV 523

Query: 242 SQWVAFP-IRW*ILRSHPVAMA 180
           + ++ FP + W +  SHP ++A
Sbjct: 524 A-YLTFPSLSWRLWESHPFSVA 544


>UniRef50_Q4SF20 Cluster: Chromosome 1 SCAF14609, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 1 SCAF14609, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 593

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +3

Query: 345 APIVDQEDPK*RRASPQRKVLKRRDLQSLNCLVSTDGVTSRVKIK 479
           +P+ D E P+  R+SP    L RRD + L+   ST GVT   +I+
Sbjct: 292 SPVADGETPQPDRSSPS---LGRRDTEELSTSFSTAGVTEETEIR 333


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -3

Query: 378 VISDPPDPLSVLLGTASTGHRSCR 307
           V+SDP D LSVLL  +STG+  CR
Sbjct: 40  VLSDPRDSLSVLLDLSSTGYCPCR 63


>UniRef50_Q74FK1 Cluster: Selenide, water dikinase; n=10;
           Bacteria|Rep: Selenide, water dikinase - Geobacter
           sulfurreducens
          Length = 345

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = -2

Query: 349 GAFRYRKHWSPFLSKPRASASKLTHRHSPLSFSPDLLSGSRFRSGGRFCEA 197
           G +R R H++PF+  PR+   +L     P +    LLS S   S GRF  A
Sbjct: 271 GCYRNRDHYAPFVGAPRSDDDRLLPLFDPQTSGGLLLSLSP-SSAGRFLAA 320


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,019,162
Number of Sequences: 1657284
Number of extensions: 7704110
Number of successful extensions: 17118
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17117
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)