Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F20
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 2e-27
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 90 2e-18
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 64 1e-10
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 36 0.022
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 35 0.067
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 32 0.36
SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035) 29 3.3
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 28 5.8
SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10) 28 7.7
SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025) 28 7.7
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 120 bits (289), Expect = 1e-27
Identities = 63/142 (44%), Positives = 86/142 (60%)
Frame = +1
Query: 229 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 408
W A+K H Y ++ E+ R I+ + I HN+ G S+KL MN GDM E
Sbjct: 29 WKAWKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHNE----GKHSFKLAMNHLGDMTSLE 84
Query: 409 FVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEXVDWRKHGAVTDIKDQGKCG 588
+T+ G K KH ++ +GA F+ PANVK+ + +DWR G VT +K+QG+CG
Sbjct: 85 ISQTLLGL-KLKKHAES------QPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCG 137
Query: 589 SCWSFSTTGALEGQHFRQSGYL 654
SCW+FSTTGALEGQHFR++G L
Sbjct: 138 SCWAFSTTGALEGQHFRKTGKL 159
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 119 bits (287), Expect = 2e-27
Identities = 61/149 (40%), Positives = 89/149 (59%)
Frame = +1
Query: 208 FDLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKY 387
FD +++W A+KL H Y + E+ R I+ ++ I KHN + S+ L MN
Sbjct: 240 FDEDEQQWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHNAEGH----SFTLAMNHL 295
Query: 388 GDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEXVDWRKHGAVTDI 567
GD+ EF G H N K GS F++P++V++P+ VDWRK G VT +
Sbjct: 296 GDLTQDEFRYFYTGMRS---HYSNYTKKQGSA----FLAPSHVQVPDTVDWRKEGYVTPV 348
Query: 568 KDQGKCGSCWSFSTTGALEGQHFRQSGYL 654
K+QG+CGSCW+FSTTG+LEGQ+F+++G L
Sbjct: 349 KNQGQCGSCWAFSTTGSLEGQNFKKTGKL 377
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 89.8 bits (213), Expect = 2e-18
Identities = 45/95 (47%), Positives = 60/95 (63%)
Frame = +1
Query: 370 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEXVDWRKH 549
+ MN GD+ EF G A HN K G A ++ P+NVK+P VDW +
Sbjct: 1 MAMNHLGDLTEDEFRYFYLGVR--AHHNST---KRG---WATYMPPSNVKIPSSVDWSQK 52
Query: 550 GAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYL 654
G VT +K+QG+CGSCW+FSTTG++EGQHFR++G L
Sbjct: 53 GYVTGVKNQGQCGSCWAFSTTGSVEGQHFRKTGSL 87
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 71.7 bits (168), Expect = 5e-13
Identities = 44/136 (32%), Positives = 68/136 (50%)
Frame = +1
Query: 247 QHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMN 426
+H+ NY+ E + R + + + I N+++ Y L MN GD E ++ +
Sbjct: 562 KHKKNYKDNKEHHTRREHFKHNLRFIHSKNRRH----AGYYLAMNHLGDRSDKE-LRVLR 616
Query: 427 GFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEXVDWRKHGAVTDIKDQGKCGSCWSFS 606
G T +N L K ++ N +P+ ++W GAVT +KDQ CGSCWSF
Sbjct: 617 GRRYTKGYNGGLPYKPD-------MASIN-DVPDEMNWVIRGAVTPVKDQAVCGSCWSFG 668
Query: 607 TTGALEGQHFRQSGYL 654
TTG +EG F ++ YL
Sbjct: 669 TTGTIEGTLFLKTKYL 684
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +1
Query: 514 VKLPEXVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSG 648
V LP VDWRK GAV +K QG CGSC++F+ GALEG HF Q+G
Sbjct: 497 VPLPPHVDWRKAGAVNSVKSQGICGSCYAFAVAGALEGAHFIQTG 541
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 211 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 390
DLV +++ F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 1188 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 1243
Query: 391 DMLHHEFVKTMNGFNKTAKHNKN 459
D+ EF + + +K N
Sbjct: 1244 DLTDDEFKSYKDALDDESKDVMN 1266
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 64.1 bits (149), Expect = 1e-10
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 390
D V +++ F+ QH YE + E R I+ + I N++ + YKL +N +
Sbjct: 38 DPVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS----LPYKLELNHFP 93
Query: 391 DMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEXV-DWRKHGAVTDI 567
D+ EF + +K N + N + E D GAV
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMNDH-------DDVIDDDVNDETQEDEEDEPSDGAVNPA 146
Query: 568 KDQGKCGSCWSFSTTGALEGQHFRQSGY 651
K QG CGSCW+F+T GA+E HF Q G+
Sbjct: 147 KGQGTCGSCWAFATAGAVEAAHFIQEGF 174
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 63.7 bits (148), Expect = 1e-10
Identities = 41/119 (34%), Positives = 59/119 (49%)
Frame = +1
Query: 226 EWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHH 405
+W A+K H Y E ED R I+ ++ I+ KHN + SYKL MN + D+
Sbjct: 180 QWHAWKDFHGKTYTGEEED-LRRAIWNDNLEIVKKHNAENH----SYKLDMNHFADLTVT 234
Query: 406 EFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEXVDWRKHGAVTDIKDQGK 582
EF + G+ + S G+ F+ +NV+LP VDWR G VT +K+Q K
Sbjct: 235 EFKQRFMGYRAASN----------STGGSTFLPLSNVQLPAEVDWRDKGFVTAVKNQEK 283
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = +1
Query: 574 QGKCGSCWSFSTTGALEGQHFRQSGYL 654
Q +CGSCW+FS+TG+LEGQHFR++G L
Sbjct: 342 QCQCGSCWAFSSTGSLEGQHFRKTGKL 368
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +1
Query: 376 MNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEXVDWRKHGA 555
MN++ DM EF + A + RGA F++P N++LP VDWR+ G
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQ---------RGATFMAPNNLELPTKVDWRQQGY 51
Query: 556 VTDIKDQGK 582
VT +K+QGK
Sbjct: 52 VTPVKNQGK 60
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 445 KHNKNLYMKGGSVRGAKF-ISPAN-VKLPEXVDWRKHGAVTDIKDQGKCGSCWSFSTTGA 618
+HN Y++ + + K+ ++P + V L + + GAV+ ++ QG CGSC++ + GA
Sbjct: 286 RHNMR-YIRSINRKNLKYKLAPNHFVDLTDGEYDQHKGAVSPVRGQGICGSCYALAAVGA 344
Query: 619 LEGQHFRQSGYL 654
+EG +F ++G L
Sbjct: 345 VEGAYFMKTGKL 356
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 217 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 396
++ + ++ QH Y+SE E + R I+ + I N+K + YKL N + D+
Sbjct: 257 IERMYRKYQGQHNKQYDSEHEVSKRKHIFRHNMRYIRSINRKN----LKYKLAPNHFVDL 312
Query: 397 LHHEF 411
E+
Sbjct: 313 TDGEY 317
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 36.3 bits (80), Expect = 0.022
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 538 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQH 633
W + +++DQG CGSCW+F A+ ++
Sbjct: 95 WPHCPTIKEVRDQGACGSCWAFGAVEAMSDRY 126
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 35.1 bits (77), Expect = 0.051
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +1
Query: 211 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 390
DLV +++ F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 93
Query: 391 DMLHHEFVKTMNGFNKTAKHNKN 459
D+ EF + +K N
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMN 116
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 34.7 bits (76), Expect = 0.067
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 211 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 390
DLV +++ F+ QH YE + E R I+ + I ++ + YKL N +G
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMKRR----SLPYKLEPNHFG 93
Query: 391 DMLHHEF 411
D+ EF
Sbjct: 94 DLTDDEF 100
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +1
Query: 211 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 390
DLV +++ F+ QH YE + E R I+ + I N+ + YKL N +
Sbjct: 209 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNR----CSLPYKLEPNHFA 264
Query: 391 DMLHHEFVKTMNGFNKTAKHNKN 459
D+ EF + +K N
Sbjct: 265 DLTDDEFKSYKGALDDESKDVMN 287
>SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027)
Length = 295
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 391 DMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEXVDWRK-HGA--VT 561
D +H +K+ NG K++K + + R ++++ A KLP DWR +G +
Sbjct: 12 DKIHQ--MKSSNGGCYDRKYDKGIKPVIKTKRPHEYLNMA--KLPTSFDWRDVNGTNYAS 67
Query: 562 DIKDQG---KCGSCWSFSTTGAL 621
++Q CGSCW+ TT A+
Sbjct: 68 TTRNQHIPQYCGSCWAHGTTSAM 90
>SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035)
Length = 396
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = -2
Query: 469 SCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*CACAQRISSC 290
SC++ CC+ Q C GG C+ C P KK T C R C SC
Sbjct: 129 SCSNGCCLGQRC--------LNGGTCVEHCEDPK-KKFSCACTPSCSGRTCESCGTYRSC 179
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = -2
Query: 484 GRSHPSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPAC 365
GR CT C+ FC GG C C+ C
Sbjct: 254 GRCWQDCTGGKCLNMFCNSRMCIQSCGGGGCKMRCNALKC 293
>SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10)
Length = 281
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +1
Query: 286 FRMKIYAEHKHIIAKHNQ---KYEMGLVSYKLGMNKY 387
+RM + A+ + ++AK+ KY MG+ Y++G+ KY
Sbjct: 148 YRMGV-AKCRMVVAKYRMGVAKYRMGVAKYRMGVAKY 183
>SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025)
Length = 1616
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 194 VLFSSLTWSRKSGVPSSCSTVSTTKARSKTISA*RY 301
VL L+W R + +C TV T R +T+ A Y
Sbjct: 336 VLVEQLSWFRPTSFVETCLTVRTIATRLRTLCAYAY 371
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,408,281
Number of Sequences: 59808
Number of extensions: 402903
Number of successful extensions: 1538
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -