Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_F18
         (418 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.     110   2e-24
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...   110   2e-24
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...   110   2e-24
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...   110   2e-24
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...   110   2e-24
BC110844-1|AAI10845.1|  201|Homo sapiens DLG2 protein protein.         29   8.2  
BC104969-1|AAI04970.1|  202|Homo sapiens DLG2 protein protein.         29   8.2  
AK125152-1|BAC86065.1|  202|Homo sapiens protein ( Homo sapiens ...    29   8.2  
AK125151-1|BAC86064.1|  202|Homo sapiens protein ( Homo sapiens ...    29   8.2  

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score =  110 bits (265), Expect = 2e-24
 Identities = 57/77 (74%), Positives = 59/77 (76%)
 Frame = +1

Query: 145 LNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQH 324
           LNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 325 HGQVIYTRATKGDDPVA 375
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  110 bits (265), Expect = 2e-24
 Identities = 57/77 (74%), Positives = 59/77 (76%)
 Frame = +1

Query: 145 LNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQH 324
           LNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 325 HGQVIYTRATKGDDPVA 375
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  110 bits (265), Expect = 2e-24
 Identities = 57/77 (74%), Positives = 59/77 (76%)
 Frame = +1

Query: 145 LNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQH 324
           LNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 325 HGQVIYTRATKGDDPVA 375
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  110 bits (265), Expect = 2e-24
 Identities = 57/77 (74%), Positives = 59/77 (76%)
 Frame = +1

Query: 145 LNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQH 324
           LNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 325 HGQVIYTRATKGDDPVA 375
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  110 bits (265), Expect = 2e-24
 Identities = 57/77 (74%), Positives = 59/77 (76%)
 Frame = +1

Query: 145 LNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQH 324
           LNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 325 HGQVIYTRATKGDDPVA 375
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC110844-1|AAI10845.1|  201|Homo sapiens DLG2 protein protein.
          Length = 201

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = -3

Query: 335 TCPWCWTTCLMRPFSLSSMSALLXREPRT-FNLSDTTAGVISLYCGTSLYSXSYVGLSNN 159
           +C WC+ +C     S + +SAL    P++ F+LS    G+  L     +    + GL  +
Sbjct: 45  SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100

Query: 158 TWLFNLSRTFPLDHF 114
                L   FP   F
Sbjct: 101 FLAIYLQAFFPSPKF 115


>BC104969-1|AAI04970.1|  202|Homo sapiens DLG2 protein protein.
          Length = 202

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = -3

Query: 335 TCPWCWTTCLMRPFSLSSMSALLXREPRT-FNLSDTTAGVISLYCGTSLYSXSYVGLSNN 159
           +C WC+ +C     S + +SAL    P++ F+LS    G+  L     +    + GL  +
Sbjct: 45  SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100

Query: 158 TWLFNLSRTFPLDHF 114
                L   FP   F
Sbjct: 101 FLAIYLQAFFPSPKF 115


>AK125152-1|BAC86065.1|  202|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43162 fis, clone FCBBF2007510. ).
          Length = 202

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = -3

Query: 335 TCPWCWTTCLMRPFSLSSMSALLXREPRT-FNLSDTTAGVISLYCGTSLYSXSYVGLSNN 159
           +C WC+ +C     S + +SAL    P++ F+LS    G+  L     +    + GL  +
Sbjct: 45  SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100

Query: 158 TWLFNLSRTFPLDHF 114
                L   FP   F
Sbjct: 101 FLAIYLQAFFPSPKF 115


>AK125151-1|BAC86064.1|  202|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43161 fis, clone FCBBF2001183. ).
          Length = 202

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = -3

Query: 335 TCPWCWTTCLMRPFSLSSMSALLXREPRT-FNLSDTTAGVISLYCGTSLYSXSYVGLSNN 159
           +C WC+ +C     S + +SAL    P++ F+LS    G+  L     +    + GL  +
Sbjct: 45  SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100

Query: 158 TWLFNLSRTFPLDHF 114
                L   FP   F
Sbjct: 101 FLAIYLQAFFPSPKF 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,795,913
Number of Sequences: 237096
Number of extensions: 1383456
Number of successful extensions: 3059
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3057
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)