Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F18
(418 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 156 1e-38
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 156 1e-38
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 156 1e-38
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 146 8e-36
AY071361-1|AAL48983.1| 521|Drosophila melanogaster RE39556p pro... 27 7.6
AE014297-1601|AAF54879.2| 521|Drosophila melanogaster CG7091-PA... 27 7.6
AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB... 27 7.6
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 27 7.6
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 156 bits (379), Expect = 1e-38
Identities = 79/116 (68%), Positives = 84/116 (72%)
Frame = +1
Query: 19 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYXKLYKE 198
MPPKKDAK+SAKQPQ LNNQVLFDK TY KLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 199 VPQYKLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQHHGQVIYTRATKGDD 366
VP YKLITP+VVSERLK+RGSL +RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 156 bits (379), Expect = 1e-38
Identities = 79/116 (68%), Positives = 84/116 (72%)
Frame = +1
Query: 19 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYXKLYKE 198
MPPKKDAK+SAKQPQ LNNQVLFDK TY KLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 199 VPQYKLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQHHGQVIYTRATKGDD 366
VP YKLITP+VVSERLK+RGSL +RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 156 bits (379), Expect = 1e-38
Identities = 79/116 (68%), Positives = 84/116 (72%)
Frame = +1
Query: 19 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYXKLYKE 198
MPPKKDAK+SAKQPQ LNNQVLFDK TY KLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 199 VPQYKLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQHHGQVIYTRATKGDD 366
VP YKLITP+VVSERLK+RGSL +RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 146 bits (355), Expect = 8e-36
Identities = 75/112 (66%), Positives = 80/112 (71%)
Frame = +1
Query: 31 KDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYXKLYKEVPQY 210
KDAK+SAKQPQ LNNQVLFDK TY KLYKEVP Y
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60
Query: 211 KLITPAVVSERLKVRGSLXRRALIELREKGLIKQVVQHHGQVIYTRATKGDD 366
KLITP+VVSERLK+RGSL +RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 KLITPSVVSERLKIRGSLDKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 112
>AY071361-1|AAL48983.1| 521|Drosophila melanogaster RE39556p
protein.
Length = 521
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 323 CWTTCLMRPFSLSSMSALLXR 261
CW CL+ +++SSMS L R
Sbjct: 2 CWRLCLLHRYAMSSMSWTLPR 22
>AE014297-1601|AAF54879.2| 521|Drosophila melanogaster CG7091-PA
protein.
Length = 521
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 323 CWTTCLMRPFSLSSMSALLXR 261
CW CL+ +++SSMS L R
Sbjct: 2 CWRLCLLHRYAMSSMSWTLPR 22
>AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB,
isoform B protein.
Length = 379
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 167 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 78
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 167 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 78
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,399,867
Number of Sequences: 53049
Number of extensions: 369269
Number of successful extensions: 1011
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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