Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F17
(456 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 80 3e-14
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 80 3e-14
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 78 1e-13
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 69 5e-11
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 52 4e-06
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 39 0.059
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 37 0.24
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 36 0.41
UniRef50_A6X4J5 Cluster: Polysaccharide pyruvyl transferase prec... 34 1.3
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n... 32 5.1
UniRef50_Q4H317 Cluster: Transcription factor protein; n=1; Cion... 32 5.1
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 31 8.9
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 31 8.9
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 79.8 bits (188), Expect = 3e-14
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDXKRKGQMIQF 361
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGD KRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 79.8 bits (188), Expect = 3e-14
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDXKRKGQMIQF 361
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGD KRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 77.8 bits (183), Expect = 1e-13
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKGQMIQF 361
+GGQ+KPIF IVLR+EC +CK + Q+ +KRCKHFELGG K +GQ+IQF
Sbjct: 49 FGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 68.9 bits (161), Expect = 5e-11
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
YGGQ+KP+F IVLRL+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 96 YGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 52.4 bits (120), Expect = 4e-06
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 245 IVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
IVL+L+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 38.7 bits (86), Expect = 0.059
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +3
Query: 189 LTVVSPNPSSKRRQKPLRKLCSVLSVPIAR*DHRLH*RDASTLSSVVT 332
+TVV P+ SS RR +P R+L SV S AR DAST SSVVT
Sbjct: 54 VTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVT 101
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 36.7 bits (81), Expect = 0.24
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 185 RAYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFEL 322
+ YGGQ+KP+F ++L C CK +LKR K F++
Sbjct: 46 QGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTKRFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 35.9 bits (79), Expect = 0.41
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 185 RAYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRK 343
+ +GG+ KPI I LR C CK + L R + FE + K+K
Sbjct: 46 KGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKKK 98
>UniRef50_A6X4J5 Cluster: Polysaccharide pyruvyl transferase
precursor; n=1; Ochrobactrum anthropi ATCC 49188|Rep:
Polysaccharide pyruvyl transferase precursor -
Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168)
Length = 391
Score = 34.3 bits (75), Expect = 1.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 8 FDVCLISVPNELKNGERTKTAQDVLQKM*MPQSTQGITVQKVQG-KARCP 154
FD+CL + N L+ G T V +K+ MP GI +QK + KA P
Sbjct: 92 FDLCLFASANLLRPGYAATTESFVFEKLNMPIVVMGIGIQKKENLKAELP 141
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 33.9 bits (74), Expect = 1.7
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 293 ALKRCKHFELGGDXKRKG 346
+++RCKHFE+GGD K KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.3 bits (70), Expect = 5.1
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -3
Query: 142 LSLDFLYCDTLCTLWHLHFLQYVLRCFGTF 53
L+L LYC TLC LH LQ V FGT+
Sbjct: 5 LALPVLYCVTLCAECFLHPLQNVFLDFGTY 34
>UniRef50_Q4H317 Cluster: Transcription factor protein; n=1; Ciona
intestinalis|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 1039
Score = 32.3 bits (70), Expect = 5.1
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 35 NELKNGERTKTAQDVLQKM*MPQSTQGITVQKVQGKARCPXLXDVMIVNSRAYG 196
NE KNG +TK A + K P ++ TV + +G P +M +N A+G
Sbjct: 328 NEGKNGGKTKQAHNESNKHATPAPSEATTVAQQEGVYTLPFPPQLMALNPGAWG 381
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 5.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 129 FCTVIPCVLCGIYIFCSTSC 70
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.5 bits (68), Expect = 8.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 357 WIICPFLXL---SPPSSKCLHLFNATCDLTLQSAHSRRS 250
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 31.5 bits (68), Expect = 8.9
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +2
Query: 104 STQGITVQKVQGKARCPXLXDVMIV-NSRAYGGQSKPIFXXXXXXXXXIVLRLECADCKV 280
+TQ +++ K GK R + + + + YGGQ P + L C DCK
Sbjct: 18 TTQKVSIYKA-GKRRASAIGERRHAEDKKGYGGQKFPKLAKPAKVTKKVTRLLTCPDCKK 76
Query: 281 RSQVALKRCKHFE 319
+ R K FE
Sbjct: 77 KFNTYGLRVKKFE 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,979,931
Number of Sequences: 1657284
Number of extensions: 6179912
Number of successful extensions: 14624
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 14309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14620
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -