Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F17
(456 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 67 5e-12
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 67 5e-12
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 67 5e-12
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 67 5e-12
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 67 5e-12
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 67 5e-12
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 67 5e-12
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 51 5e-07
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958... 29 1.3
03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058 28 3.1
01_06_0512 + 29942429-29942929 27 7.2
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 27 9.5
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 78 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 50 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 48 MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQ 155
MVNVPK ++TY +QYKK K+ +AQ
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQ 38
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 78 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 50 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 48 MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQ 155
MVNVPK ++TY +QYKK K+ +AQ
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQ 38
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 77 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 78 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/52 (55%), Positives = 35/52 (67%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGD K KG
Sbjct: 50 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 48 MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQ 155
MVNVPK ++TY +QYKK K+ +AQ
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQ 38
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 50.8 bits (116), Expect = 5e-07
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 245 IVLRLECADCKVRSQVALKRCKHFELGGDXKRKG 346
IVL+L+C CK SQ +KRCKHF++GGD K KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>03_04_0037 +
16694760-16695227,16695563-16695642,16695735-16695828,
16695973-16696071,16696650-16696742,16696822-16696941,
16697422-16697525,16697734-16697806,16698023-16698085
Length = 397
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 195 VVSPNPSSKRRQKPLRKLCSVLSVPIAR 278
VV+P P +R+Q+PL C S+P R
Sbjct: 58 VVAPAPRHRRKQRPLHYACRPTSLPCRR 85
>03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058
Length = 339
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -2
Query: 389 QWSYLLEAFKIGSSVPFSXCHHRAQSACISSMQPVISPCNRH 264
+W + E F+ G+ S H R S+C P P ++H
Sbjct: 138 RWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQH 179
>01_06_0512 + 29942429-29942929
Length = 166
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 177 TIITSXSXGQRAFPWTFCTVIPCVLCGIYIFCSTSCAVLVRSPF 46
T+ + S RA W V+PC + G Y+ S A S F
Sbjct: 8 TVGEARSGVSRAQVWACAVVVPCFIVGAYLAESYGAAAAASSFF 51
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 67 SAGRTAKNVNATKYTRYHSTKSPRKG 144
S+GRTA++ + R+H T RKG
Sbjct: 99 SSGRTARDAAVAQQERHHDTIKRRKG 124
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,006,788
Number of Sequences: 37544
Number of extensions: 178649
Number of successful extensions: 424
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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