Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F17
(456 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-2|CAA90434.1| 105|Caenorhabditis elegans Hypothetical pr... 77 8e-15
AF304121-1|AAG50234.1| 105|Caenorhabditis elegans 60S ribosomal... 77 8e-15
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF026201-1|AAB71239.1| 113|Caenorhabditis elegans Hypothetical ... 27 4.9
Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical pr... 27 8.6
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 27 8.6
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 27 8.6
>Z50109-2|CAA90434.1| 105|Caenorhabditis elegans Hypothetical
protein C09H10.2 protein.
Length = 105
Score = 76.6 bits (180), Expect = 8e-15
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKGQMIQF 361
+GGQ+KPIF IVLR+EC +CK + Q+ +KRCKHFELGG K +GQ+IQF
Sbjct: 49 FGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 48 MVNVPKQRRTY-XXXXXXXXXXXXSQYKKSKERHAAQ 155
MVNVPK RRT+ +QYKK KE AQ
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQ 37
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 73 GRTAKNVNATKYTRYHSTKSPRKGTLPXAXRRYDRKQQGLRWSVQTHLQKEGK 231
G+ K+ N K T+Y K ++ RRYDRKQ G + +K+ K
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAK 62
>AF304121-1|AAG50234.1| 105|Caenorhabditis elegans 60S ribosomal
protein L44 L41 protein.
Length = 105
Score = 76.6 bits (180), Expect = 8e-15
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +2
Query: 191 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXKRKGQMIQF 361
+GGQ+KPIF IVLR+EC +CK + Q+ +KRCKHFELGG K +GQ+IQF
Sbjct: 49 FGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 48 MVNVPKQRRTY-XXXXXXXXXXXXSQYKKSKERHAAQ 155
MVNVPK RRT+ +QYKK KE AQ
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQ 37
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 73 GRTAKNVNATKYTRYHSTKSPRKGTLPXAXRRYDRKQQGLRWSVQTHLQKEGK 231
G+ K+ N K T+Y K ++ RRYDRKQ G + +K+ K
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAK 62
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 117 IPCVLCGIYIFCSTSCAVLVRSPFLSSFGTDIKQ 16
IPC++ GIYI + ++ +S SS T +KQ
Sbjct: 233 IPCIIFGIYIALTIKIMIMKQSSLKSSEITILKQ 266
>AF026201-1|AAB71239.1| 113|Caenorhabditis elegans Hypothetical
protein D1079.1 protein.
Length = 113
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -1
Query: 150 QRAFPW-TFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTD 25
QR++P+ TF + +LC +YI C S +V + FL +F D
Sbjct: 30 QRSYPFQTFLAFLDFMLCALYIHCFGLLSISVEYKIAFLYNFVMD 74
>Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical
protein T22C1.9 protein.
Length = 195
Score = 27.1 bits (57), Expect = 6.5
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 181 VYDHNVX*XWA-ACLSLDFLYCDTLCTLWHL 92
+YDH+ W +S+ F++C C +W +
Sbjct: 27 IYDHHYYPMWFWIVISVGFVFCTLSCAVWFM 57
>Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical
protein F26H11.4 protein.
Length = 739
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 73 GRTAKNVNATKYTRYHSTKSPRKGTLPXAXRRYDRKQQGLRWSVQTHLQKE 225
G KN+++ R HS+K RKG L + + RK G+ + L K+
Sbjct: 207 GPAQKNLSSQ---RKHSSKRNRKGLLRNVAKLWGRKSDGIANPTKAMLSKK 254
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 136 LDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFE 41
++ + C+T L FL +V C+GT T +
Sbjct: 736 IELIQCETSVKLLDRRFLMHVSICYGTHTFLD 767
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 136 LDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFE 41
++ + C+T L FL +V C+GT T +
Sbjct: 736 IELIQCETSVKLLDRRFLMHVSICYGTHTFLD 767
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,595,264
Number of Sequences: 27780
Number of extensions: 158774
Number of successful extensions: 467
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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