Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F16
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 118 7e-28
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 111 1e-25
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 86 4e-18
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 80 3e-16
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 75 9e-15
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 38 0.001
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 1.3
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 27 1.8
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 2.3
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 4.1
SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr 1|... 25 7.1
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.4
SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 25 9.4
SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces ... 25 9.4
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 118 bits (284), Expect = 7e-28
Identities = 56/123 (45%), Positives = 73/123 (59%)
Frame = +3
Query: 279 RTMDASQRGXXXXXXXXXXXSQSRYLXELETLDCGKPVKQSEXEVYFSASVLRYYAGKAD 458
R ++QRG YL +ETLD GK + + +V +A RYY G AD
Sbjct: 80 RKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGGWAD 139
Query: 459 KILGNTIPSDGEVLTFTMXEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQT 638
K G TI +D + +T EP+GVCGQIIPWN+P M +WKIAPA+A G T++LK AE T
Sbjct: 140 KDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELT 199
Query: 639 PLT 647
PL+
Sbjct: 200 PLS 202
Score = 47.6 bits (108), Expect = 2e-06
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 88 KVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFHRL 267
K ++ LFINN+ VD+V +P E +I +VA+ D+ D+D+AV A+ AF
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQ-- 74
Query: 268 FPMAVPWTLLNAA--SYCLS 321
PW ++A CLS
Sbjct: 75 --TDAPWRKFSSAQRGRCLS 92
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 111 bits (266), Expect = 1e-25
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Frame = +3
Query: 279 RTMDASQRGXXXXXXXXXXXSQSRYLXELETLDCGKP-VKQSEXEVYFSASVLRYYAGKA 455
+ + S++G + L +E +D GKP V + +V + ++LRY AG A
Sbjct: 73 KKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWA 132
Query: 456 DKILGNTIPSDGEVLTFTMXEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQ 635
DKI G IP+ E L + P+GVCGQI+PWNYP+ M WKIAPALAAG +++K AE
Sbjct: 133 DKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAET 192
Query: 636 TPLT 647
TPL+
Sbjct: 193 TPLS 196
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 86.2 bits (204), Expect = 4e-18
Identities = 41/99 (41%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Frame = +3
Query: 354 LXELETLDCGKPVKQSEXEVYFSASVLRYYAGKADKILGNT-IPSDGEVLTFTMXEPVGV 530
L + TL+ GK + ++ EV ++A + ++AG+A +I G++ + S+ + T+ +PVGV
Sbjct: 103 LATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDSSMSSNPQNRIITIKQPVGV 162
Query: 531 CGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 647
G I PWN+P M++ K+ ALAAGCTVV++PA +TP T
Sbjct: 163 VGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFT 201
Score = 29.9 bits (64), Expect = 0.33
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 115 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 258
+I +WV A S KTF NP + V + + A+ A +AF
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAF 74
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 79.8 bits (188), Expect = 3e-16
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Frame = +3
Query: 354 LXELETLDCGKPVKQSEXEVYFSASVLRYYAGKADKILGNTIPSDGEVLTF--TMXEPVG 527
L ++ TL+ GKP+ Q+E EV + L++YA +A + G+ PS + F ++ +PVG
Sbjct: 97 LVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDVAPSSLQSQNFLISIKQPVG 156
Query: 528 VCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 641
V I PWN+P M++ K ALAAGCT + PA +TP
Sbjct: 157 VSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTP 194
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 94 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 258
D + + F+ +W+ + + KTF NP +I +VA+ + A++AA +AF
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAF 68
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 74.9 bits (176), Expect = 9e-15
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 297 QRGXXXXXXXXXXXSQSRYLXELETLDCGKPVKQSEXEVYFSASVLRYYAGKADK---IL 467
QRG + L ++T++CGKP + ++ A + YYA A+ +
Sbjct: 85 QRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDNPTV 144
Query: 468 GNTIPSDGEVLTFTMXEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 641
+P++ F P GV G I PWN+P+ M WK+ PA+A+G VVLKP+E P
Sbjct: 145 KVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAP 202
Score = 32.3 bits (70), Expect = 0.062
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 LFINNEWVDAV--SKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 258
LFI+ ++V + + K P INP E +I A D+D AV A F
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF 73
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 504 FTMXEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQT 638
+ EP+GV ++ WNYP+ I AL AG +V+K +E T
Sbjct: 122 YVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELT 166
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 115 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKAD 222
F+ D S+ TF TI PQ+ + E K+D
Sbjct: 224 FLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSD 259
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 395 TIRXRSILF-RKRAQIL--RWKSGQDIRKYHSFRRRSPYVHHEXACRSVRSDN 544
T+ + ++F KR Q L ++K+GQ +R+ + + YV+ E C++ D+
Sbjct: 543 TVHGKIVVFGEKRLQALTEKFKNGQLVRRDYRYWWTPVYVNQELRCKNAYCDS 595
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 242 AATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTST 90
+ +A +SA S + TC +S+ G LTA ++++ NS ST
Sbjct: 442 SGSATLVSASSATGTCASYLSAAGSSATNAISLTADSNAVSRNSSASTMST 492
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 527 SVRSDNTVELPHTNDVLENSTSLSCRMYR--CSEAS*TN 637
SVR +NT +L D++E + R++R SEA+ N
Sbjct: 357 SVRDENTKKLKELQDIIEEQSKHMARLHREGFSEAAENN 395
>SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 140 LSAKKPSLPSTHKMKQS*HRSLKEIRRILIWPSPQQRK 253
+ PS S ++ S HR LK+ R IL SP++++
Sbjct: 1 MDTSPPSYDSHFTLETSMHRQLKDKRIILASGSPRRKQ 38
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 287 HGTAMGNKRWNAFFAAATAKSISALSPSATCVMTVSS 177
+ T + WN+ +AAT S S+ S S + V++V+S
Sbjct: 155 NSTTNSSISWNSSTSAATNTSSSSSSSSQSSVVSVNS 191
>SPBC3B9.06c |apg3||autophagy associated protein Apg3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 275
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 118 INNEWVDAVSKKTFPTINPQDETVITQVAEGDKADI 225
+N EWVD + T + QD+ I+ + D +DI
Sbjct: 85 VNEEWVDIETDDTRNKDDDQDDDAISSI-HSDTSDI 119
>SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 343
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 497 DFSV*RNGIS*YLVRFSSVISEHACGKVYFXFGLFYRFST 378
+F R I+ + F + +S+ K+Y FG Y FST
Sbjct: 209 EFEADRRAITITINSFGTELSKEERAKMYPSFGRLYPFST 248
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,686,687
Number of Sequences: 5004
Number of extensions: 54581
Number of successful extensions: 158
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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