Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F16
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 132 2e-31
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 91 9e-19
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 90 1e-18
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 86 2e-17
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 73 2e-13
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 66 2e-11
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 51 9e-07
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 50 1e-06
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 46 3e-05
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 29 2.5
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 28 7.5
SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19) 28 7.5
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 28 7.5
SB_54208| Best HMM Match : fn3 (HMM E-Value=0) 27 9.9
SB_44316| Best HMM Match : Exo_endo_phos (HMM E-Value=0.14) 27 9.9
SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10) 27 9.9
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 132 bits (320), Expect = 2e-31
Identities = 63/123 (51%), Positives = 77/123 (62%)
Frame = +3
Query: 279 RTMDASQRGXXXXXXXXXXXSQSRYLXELETLDCGKPVKQSEXEVYFSASVLRYYAGKAD 458
RTMDAS RG + YL LE+ D GK + +++ +V RYYAG AD
Sbjct: 1257 RTMDASARGHFLYKLADLCERDADYLARLESYDGGKVINEAKIDVQGMIGCFRYYAGWAD 1316
Query: 459 KILGNTIPSDGEVLTFTMXEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQT 638
K+ G TIP+DG T+T EPVGV G I PWN+P+ M K+APALA GC V+LKPAEQT
Sbjct: 1317 KVTGKTIPADGPFFTYTRHEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPAEQT 1376
Query: 639 PLT 647
PLT
Sbjct: 1377 PLT 1379
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 132 bits (318), Expect = 3e-31
Identities = 65/123 (52%), Positives = 76/123 (61%)
Frame = +3
Query: 279 RTMDASQRGXXXXXXXXXXXSQSRYLXELETLDCGKPVKQSEXEVYFSASVLRYYAGKAD 458
RTMDAS RG YL LET+D GK S ++ SA+ RYYAG AD
Sbjct: 387 RTMDASMRGKLLYKLAQLIDRDIAYLASLETIDSGKLFSDSVGDMQSSANCFRYYAGWAD 446
Query: 459 KILGNTIPSDGEVLTFTMXEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQT 638
K+ G TIP+DG +T EPVG+ G I PWN+P+ M S KIAPALA G V+LKPAEQT
Sbjct: 447 KVTGKTIPADGPYFVYTRHEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAEQT 506
Query: 639 PLT 647
PLT
Sbjct: 507 PLT 509
Score = 64.5 bits (150), Expect = 7e-11
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +1
Query: 109 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 258
+LFINNE+VD S K FPTINP I ++EGDK D+D AV AAK+AF
Sbjct: 331 ELFINNEFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEAF 380
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 90.6 bits (215), Expect = 9e-19
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
Frame = +3
Query: 354 LXELETLDCGKPVKQSEX-EVYFSASVLRYYAGKADKILGNTIP------SDGEVLTFTM 512
L E+E++D GK +E ++ + LRY AG A KI G T+ D + +T
Sbjct: 125 LAEIESIDNGKSAVIAEHVDIRLAVDFLRYMAGFATKIEGRTVQVSVPFMPDAQFHGYTR 184
Query: 513 XEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 647
E VGV G I+ WN+P+ + WK+ PALA GCT VLKPAE TPLT
Sbjct: 185 REAVGVVGAIVAWNFPLLLACWKLGPALATGCTTVLKPAEDTPLT 229
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1
Query: 100 KYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 258
K+ + I ++W DA +T +NP VI +V + +ID AV AA++AF
Sbjct: 42 KHHQCLIGDQWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAF 94
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/100 (39%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Frame = +3
Query: 354 LXELETLDCGKPVKQSEXEVYFSASVLRYYAGKADKILGNTIPSD--GEVLTFTMXEPVG 527
+ ++ TL+ GKP+ ++ EV ++A+ + +++ +A ++ G+ IPS+ G+ + T EPVG
Sbjct: 25 IAKIITLESGKPLLEARGEVLYAANYIEFFSEEAKRVYGDIIPSNNPGQKVLITK-EPVG 83
Query: 528 VCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 647
VC I PWN+PI M+ K + A+A GCT++ +P+ QTPL+
Sbjct: 84 VCASITPWNFPIAMLVRKASSAIACGCTMIARPSGQTPLS 123
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/120 (36%), Positives = 61/120 (50%)
Frame = +3
Query: 285 MDASQRGXXXXXXXXXXXSQSRYLXELETLDCGKPVKQSEXEVYFSASVLRYYAGKADKI 464
+ S+RG + + ++E D GKP ++ +V A VL YYAG A +
Sbjct: 332 LSGSERGRILGDASRLVRKRREDIAKVEVHDNGKPFHEALWDVDNVADVLEYYAGVAPTL 391
Query: 465 LGNTIPSDGEVLTFTMXEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPL 644
G + +T EP+GV G I WNYPI WKIAPA+A G T+V KP+ TP+
Sbjct: 392 SGQHVQLPNGSFAYTRREPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLTPM 451
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/88 (43%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 381 GKPVKQSEXEVYFSASVLRYYAGKADKILGNTIPSDGEVLTF-TMXEPVGVCGQIIPWNY 557
GK + + E Y S YYA + + +G T S + T EPVGV G I PWN+
Sbjct: 94 GKTLAEGVGETYRSGQFFHYYAAEVLRQMGETAESVRPGIEIETRREPVGVVGIITPWNF 153
Query: 558 PIPMMSWKIAPALAAGCTVVLKPAEQTP 641
P +WKIAPALA G +V KPA Q P
Sbjct: 154 PTATGAWKIAPALAFGNAIVWKPANQVP 181
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 115 FINNEWVDAVSKKTFPTINPQD-ETVITQVAEGDKADIDLAVAAA 246
+I EWV+ +K + I+P D VI A+ DKA + A+AAA
Sbjct: 9 YIAGEWVEG-NKGSVANISPADISDVIGHYAQADKAQTEAAIAAA 52
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 67.7 bits (158), Expect = 8e-12
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = +3
Query: 345 SRYLXELETLDCGKPVKQS-EXEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMXEP 521
+R + LE++D GK V+++ + ++ A L ++AG A + D E+ + +P
Sbjct: 718 ARLIAVLESMDNGKSVRETRDCDIPNVARHLYHHAGWAQLM-------DTEMQGW---KP 767
Query: 522 VGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 647
VGV G I+PWN+P+ ++ WK+ PALA G TVVLKPA T L+
Sbjct: 768 VGVVGGIVPWNFPLMLLCWKVCPALAMGNTVVLKPATYTRLS 809
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Frame = +3
Query: 381 GKPVKQSEXEVYFSASVLRYYAGKADKILGNT-IPSDGEV---------LTFTMXEPVGV 530
G+ + + + EV S L YY ADK GN + SD + T + EPVGV
Sbjct: 1235 GQSLDECKAEVDASIQRLFYYGAYADKFGGNRPVFSDKDTKPEETPFYGATIKIHEPVGV 1294
Query: 531 CGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPL 644
G P + +APA+ G TVV+ P+E+ P+
Sbjct: 1295 IGIACPDECSLLAFVSLLAPAIIRGNTVVIVPSEKYPV 1332
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = +3
Query: 495 VLTFTMXEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 647
V+ +++ P GV G I PWN P+ ++S+KIAPA+A+GCTVV KP+E T +T
Sbjct: 138 VVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMTSVT 188
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 115 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 258
FIN E++ + + +P V +V + K +DLAVAAA AF
Sbjct: 14 FINGEFLSC--DRYIDSYDPSRGEVYCKVPDSGKEHVDLAVAAANAAF 59
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +1
Query: 76 INMVKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAK 249
+N + + + + +LFIN E+VD+ KTF TINP D TV+ QV+ D+D AV AAK
Sbjct: 700 VNYMTIHMPH-QLFINGEFVDSHHGKTFNTINPTDGTVLAQVSLATHEDVDDAVDAAK 756
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 50.8 bits (116), Expect = 9e-07
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 342 QSRYLXELETLDCGKPVKQSEXEVYFSASVL--RYYAGKADKILGNTIPSDGEVLTFTMX 515
+S + ETLD G + ++ F+ VL R A I+G + ++G L +++
Sbjct: 91 RSEDFSKAETLDTGTVISRANNNKEFANEVLNIRVLVDHALSIMGEST-AEGGTLCYSIR 149
Query: 516 EPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 647
+GV I W+ +P + + PA+A+G VV+KP+ PLT
Sbjct: 150 HSLGVVAIITSWSQALPSILRHLVPAMASGNCVVIKPSCLAPLT 193
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +3
Query: 549 WNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 641
WN+P+ M++ K A ALAAGCTV++KP+E+TP
Sbjct: 149 WNFPLGMITRKAAAALAAGCTVIIKPSEETP 179
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 109 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 258
K ++ +W+D S TFP NP + QVA + +LAV A KAF
Sbjct: 64 KGYVGGKWLDGDS--TFPVYNPATGEELGQVANMGAKEGELAVQEAYKAF 111
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +3
Query: 363 LETLDCGKPVKQS-EXEVYFSASVLRYYAGKADKILGNTIP---SDGEVLT 503
LETLD GKP S ++ F+ RYYAG ADKI G TIP DGE +T
Sbjct: 33 LETLDNGKPYNDSFNVDLEFTIKCYRYYAGWADKIHGKTIPLGKVDGEQMT 83
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 516 EPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 647
EP+GV I WNYP+ ++ + A+A G VLKP+E T
Sbjct: 71 EPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASAT 114
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +3
Query: 354 LXELETLDCGKPVKQSEXEVYFSASVLRYYAGKADKILGNTIPSD--GEVLTFTMXEPVG 527
L +L +L+ GK + E+ V Y G + G PS+ G L PVG
Sbjct: 92 LGKLLSLEVGKIFPEGVGEIQEYIDVCDYAVGLSRMFDGKVFPSERPGHAL-LEQWNPVG 150
Query: 528 VCGQIIPWNYPIPMMSWKIAPALAAG 605
G I +N+P+ + W A ++ G
Sbjct: 151 TVGVITAFNFPVAVFGWNTAISMTCG 176
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 91 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGD 213
VDV+ TK+ E+ D V+ T PT P+D+ + VA+ D
Sbjct: 1131 VDVRRTKM----EYTDDVATLTIPTTRPEDKGMYKCVAKND 1167
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 535 PHTPTGSFMVNVRTSPSEGMVFPNILSAFP 446
P PT F+V+++ SPS +V S++P
Sbjct: 248 PRIPTSLFLVSLQASPSPSLVHLQASSSYP 277
>SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19)
Length = 1053
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = -2
Query: 508 VNVRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSXSDCFTGFPQSKVSSSXRYLDWDSRS 329
+NV + G+V P +L P + T+ Y + +++ + +
Sbjct: 201 LNVNETSYSGIVVPALLQKLPNSFRLTITRGYQNFMSWSMERLLAEIRAEVELREEHKPI 260
Query: 328 SASLSNRRPR*EASMVR 278
S+ SN++P+ E SM+R
Sbjct: 261 SSEASNKKPQDEWSMIR 277
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 376 SKVSSSXRYLDWDSRSSASLSNRRPR*EASMVRPWGING 260
SK+ + L D SA+ N RP+ + +++ PW +NG
Sbjct: 1263 SKIKDKNKVL-MDVLKSAANKNCRPKNDKTVMLPWALNG 1300
>SB_54208| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1292
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 281 TAMGNKRWNAFFAAATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLL 120
TA GN W+A TA++ A+SP SS + V + T H +L
Sbjct: 271 TAAGNGSWSAPVVCWTAEAAPAVSPPNVRGYNTSSTSITVTWGDIPTGELHGIL 324
>SB_44316| Best HMM Match : Exo_endo_phos (HMM E-Value=0.14)
Length = 404
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 430 TLAEKYTSXSDCFTGFPQSKVSSSXRYL-DWDSRSSASL-SNRRP 302
+LAEK S CF+ FP + + +S + D D + + S+ RP
Sbjct: 262 SLAEKVASSDKCFSSFPNNNILNSIFFFSDTDHQEIIEICSSLRP 306
>SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10)
Length = 260
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/38 (28%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 387 PVKQSEXEVYFSAS-VLRYYAGKADKILGNTIPSDGEV 497
P+ +++ +FS++ ++RY A +DK+ G+ + G+V
Sbjct: 50 PLLETKEGTFFSSNTIIRYLAASSDKLYGSDLFQRGQV 87
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,104,062
Number of Sequences: 59808
Number of extensions: 407318
Number of successful extensions: 1110
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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